DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1494 and abca2

DIOPT Version :9

Sequence 1:NP_001259763.1 Gene:CG1494 / 33102 FlyBaseID:FBgn0031169 Length:1695 Species:Drosophila melanogaster
Sequence 2:XP_005165286.1 Gene:abca2 / 100006090 ZFINID:ZDB-GENE-050517-1 Length:2504 Species:Danio rerio


Alignment Length:1975 Identity:402/1975 - (20%)
Similarity:729/1975 - (36%) Gaps:571/1975 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 GFEDCEE-----MRESVIEN-GLFAGLCF----DGSPFVEDQVFEEDTLESYSNIQPMLNYTILL 180
            ||.|.|.     :.::..:| .:||.:.|    |||                  :.|.:.|.|..
Zfish   635 GFPDEESIVNYTLNQAYHDNVSVFASVIFQTNKDGS------------------LPPHVMYKIRQ 681

  Fly   181 PSELRMLDGDFRMANWMTLYNDDPNTFVLTRLNQPYEGGFVGYVREGFIRLQKSVSESFL-VLTS 244
            .|.......:.|.|.|    ...|||           ||.. |...||:.:|..:..:.: ....
Zfish   682 NSSFTEKTNEIRRAYW----RPGPNT-----------GGKF-YFLYGFVWIQDMIERAIINTFVG 730

  Fly   245 HKSL-PTIQIRRFPITGREQDPLMGNLNYGMPFIIIIGFLFPAQLFVWQVVSEKQSQVRQFLINM 308
            |..: |...::.||.....:|..:..:.:.||..::|.:::...:.:..:|:||:.::::.:..|
Zfish   731 HDVVEPGNYVQMFPYPCYTRDDFLFVIEHMMPLCMVISWVYSVAMMIQHIVAEKEQRLKEVMKMM 795

  Fly   309 NIGNLIHFVSWYLKGLIYEMISSLIIAALLKIRWDQDHG-VLTQTPWYILILVLFCYNCAAVAFA 372
            .:.|.:|:|:|::.|.:...||...:.|:||      :| ||..:..:|:.|.|..|..|.:.|.
Zfish   796 GLNNAVHWVAWFITGFVQLSISVTALTAILK------YGKVLLHSDPFIIWLFLTIYAVATIMFC 854

  Fly   373 IMVAAFFRNALNAVRVLTILWIMSYVPTFILSNNLEGNIHALRYVSYALPNVVATLVI-----EF 432
            .:|:..:..|..|.....|::.:||||...::...|.....:......:.::::|...     .|
Zfish   855 FLVSVLYSKAKLASACGGIIYFLSYVPYMYVAIREEVAHDKITAFEKCIASLMSTTAFGLGSKYF 919

  Fly   433 LIERESIVHITWEDSGYRLN---YDGGHITVTASSWIFMLNALVYCAIGLYVD------------ 482
            .:...:.|.|.|.    .:|   .:|....:..|..:..::|:||..:..|::            
Zfish   920 ALYEVAGVGIQWR----TINQSPVEGDDFNLLLSMVMLTIDAIVYGVLTWYIEAVHPGMYGLPRP 980

  Fly   483 --------MWRGGDRSGKKMKKP---NTNASVQEDPY-----HERGDSFTHQGQAIGVNSTKIYE 531
                    .|.|..|. :..:.|   .|..||.|:..     |.|.:            .|:..|
Zfish   981 WYFPLQKSYWLGSGRI-ETWEWPWGGGTRLSVMEEDQACAMEHRRSE------------ETRGIE 1032

  Fly   532 VEPSHRRFKLKIKKLCKRFATNDRPALNLFSWNVYENEVTVLMGHNGCGKSTLLKILAGLVEPSR 596
            .||:|....:.|.||.|.:.|..:.|||..|.|::||:|...:||||.||:|.:.||.||..|:.
Zfish  1033 EEPNHLPLVVCIDKLTKVYKTGSKLALNKLSLNLHENQVVSFLGHNGAGKTTTMSILTGLFPPTS 1097

  Fly   597 GTVMISSHNIQTERKAASMELGIAFGHDMLLTGFTVIDYLRFICRVKGLHNNIEIDGQSNYFLNV 661
            |:..|..|:|:||.:.....||:...|::|....:|.::|.|..|:||:... :|..:.:..:..
Zfish  1098 GSATIYGHDIRTEMERIRQNLGMCPQHNVLFDKLSVEEHLWFYSRLKGMAEE-DIRKEMDKMIED 1161

  Fly   662 LQIGGLKTKRIRTLTDRDLCLVSICCAFVGNSPIILIDDVHSDLDKRTQSLVWNLINEEKSKRTI 726
            |::...:...::||:......:|:..||||.|..:::|:..:.:|...:..:|:||.:.|..|||
Zfish  1162 LELSNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAVILDEPTAGVDPYARRAIWDLILKYKQGRTI 1226

  Fly   727 ILVSNSPALAENIADRMAIMSNGELKCTGTKPFLKNMYGHGYRLTCVKGKNYKRDELFGMMNSYM 791
            :|.::....|:.:.||:||:|:|:|||.|:..|||:.||.||:||.||.::   |......:|..
Zfish  1227 LLSTHHMDEADLLGDRIAIISHGKLKCCGSPLFLKSTYGDGYKLTLVKKQS---DSHTADQSSQS 1288

  Fly   792 PNMSIE---------------------RDIGYKVTFVLENKFEDQ--FPMLIDDLEENMQQLGVV 833
            |:.||.                     .|...::::||.::...:  |..|...||:::..|.:.
Zfish  1289 PSSSISPCSENRVTQFIRQYVASCLLVSDSNTELSYVLPSEAVKKGCFERLFQALEQSLDSLALT 1353

  Fly   834 SFRIRDTSMEEIFLRFGCED--------------------------------------------- 853
            ||.:.||::||:||:...||                                             
Zfish  1354 SFGVMDTTLEEVFLKVSEEDLSLENSDADMKDSPGGASAGKPSGLLGGPQCEGAPAAAVMRPEVE 1418

  Fly   854 ---------------------------NDQSGAF--------------QSHENAQVLLEEY--YS 875
                                       .|:.|.:              |..::|.:..||.  ..
Zfish  1419 LSNLMMCSRLSPSQASLQSGSSLGSVRGDEGGPYSEFYGDYCPLFDNGQDLDSASLRDEESSPQP 1483

  Fly   876 TLAEANEKGRRTGW--KLFFLHGRAVIYKRWIAAHRHWIVLIFEVLAMAL---VAVCTFSSIFIY 935
            |:.|.....:..||  ||...||  :|.||:..|.|:...:..::|..|.   ||:....|:...
Zfish  1484 TVLEGQGSFKLDGWWLKLRQFHG--LIVKRFHCAKRNTKGIFSQILLPAFFVCVAMTVALSVPEI 1546

  Fly   936 GKNYELEPLTFNLSQLH------------------------------------------------ 952
            |   :|.||..:.||.|                                                
Zfish  1547 G---DLPPLILSPSQYHNYTQPRGNFIPYANEDRSQYRTKFSPDAGPQRIVNTLRLPSGVGATCI 1608

  Fly   953 -------TVDAFVE---------------------LFSEEEDV---------------KDMHAYY 974
                   |:|...:                     |.|..:.|               .|..|::
Zfish  1609 LKTPFNSTLDQLAQTLNPYANNSKTLAARYFDSMCLDSFTQGVPLSNFVPPPPSPAPSDDPEAHF 1673

  Fly   975 TELLYWYDAHVAT---------------------------------------------------- 987
            .:.|:.|.|...|                                                    
Zfish  1674 EDGLWNYTAAPTTVREMATSPPTLPLSIHEPVRCICSMQGTGFSCPSGVGGRPPLMKVVTGDILV 1738

  Fly   988 -LTKNRHNAYALLTQNQFTAHVNSRYIFG-------ATFDQKI------------VTAWFNNIPL 1032
             :|....:.|.|.|.::...|....:..|       |:|.:|.            ....:||...
Zfish  1739 DITGRNVSEYLLYTSDRLRLHRYGGFTVGNIQKSVPASFGRKTPPMVRKIAVRRSSQVLYNNKGY 1803

  Fly  1033 HSAPYALNVVHNAVAR-HLFDEEAT-----IDVTLAPLPFRTAINTFPPSSHTFGGCLAFGICFV 1091
            ||.|..|||::||:.| :|...:..     |.||..|:...:|..:...........:|..|...
Zfish  1804 HSMPTYLNVLNNAILRANLPSSKGNPSAYGITVTNHPMNRTSASLSLDYLLQGTDVVIAIFIIVA 1868

  Fly  1092 LTFIWPAFAIYMITERGSLLKKQQFLAGVRVCSYWTFTVLYDLLFLLIFCACVVVMVALYENPNH 1156
            ::|:..:|.::::.|:.:..|..||::|....:||....::|:|..|:...|.|:::.:::.|.:
Zfish  1869 MSFVPASFVVFLVAEKSTKAKHLQFVSGCDPVTYWLANYIWDMLNYLVPATCCVLILFVFDLPAY 1933

  Fly  1157 D-----------VMLYGYISVTLML--GGFWVILLAYLMASLCRNPCYGFLWLCGIN-SIGLVCF 1207
            .           .:|||: |:|.::  ..||..:           |...:::|..|| .||:.. 
Zfish  1934 TSPTNFPAVLSLFLLYGW-SITPIMYPASFWFEV-----------PSTAYVFLIVINLFIGITA- 1985

  Fly  1208 SQFYRTHPESMLLEPTFMAMYTVATVICKLF-MIYEFKLICMDPVVNFTSVEVFKCNSIPNCC-- 1269
                                 ||||.:.:|| ...:.||:                ||....|  
Zfish  1986 ---------------------TVATFLLQLFERDKDLKLV----------------NSYLKSCFL 2013

  Fly  1270 IKSNYGTFTAGIYHDLVILTLLDIILLACLFVSEYHSILGFAD---------------------- 1312
            |..||     .:.|.|:.:...:       :::||::.:|..|                      
Zfish  2014 IFPNY-----NLGHGLMEMAYNE-------YINEYYAKIGQFDKVKSPFEWDIVTRGLVAMTIEG 2066

  Fly  1313 ---------CR-----------LDTRTNESPDSN---QESRAFPGILSNDTAAL--VDKEHTSRL 1352
                     |:           ::::..|..|.:   :..|...|...||...:  :.|.:.|| 
Zfish  2067 FVGFLITILCQYNFLRKAQRVPVNSQPVEDDDVDVACERRRVLRGDADNDMLKIDNLTKVYKSR- 2130

  Fly  1353 NEEERSKYAAVGIGIVSKYRRNRVLRDLDFTLAKSECLSITGANNSGKTTLLKVVVNETKMNAGQ 1417
                             |..|...:..|...:...||..:.|.|.:||||..|::..:.....|:
Zfish  2131 -----------------KMGRILAVDRLCLGVRPGECFGLLGVNGAGKTTTFKMLTGDESTTGGE 2178

  Fly  1418 LWIHDYSVNTHRVQCYRMVGYCPQKDSLPSEFTPRELLYIHAMLQGHRHRIGRELSEALLRLVGL 1482
            .:|.::|:....::..:.:|||||.|:|..:.|.||.|.::..|:|...:....:.:..|..:.|
Zfish  2179 AFIQEHSILRELLRVQQSIGYCPQFDALFDDLTAREHLELYTRLRGIPWKDEERVVQWALEKLEL 2243

  Fly  1483 TPCWNRSVRMCTTGQIRRLYFAYAVLGSPDLICVDGVPAGLDPTGKRIILMMTSTMQAMGSSFLY 1547
            :...::.....:.|..|:|..|.|::|.|.||.:|....|:||..:|.:..:...:...|.|.:.
Zfish  2244 SKYADKPAGTYSGGNKRKLSTAIALIGYPSLIFLDEPTTGMDPKARRFLWNLILDIIKTGRSVVL 2308

  Fly  1548 TMLTGLDAERLSLRTPLLLEGQLWMIRPMDTETENYKSGYQLEVRFKRKVNPNVSMSRATWNLIN 1612
            |..:..:.|.|..|..:::.|:...:..:......:..||.:.||.|...:.             
Zfish  2309 TSHSMEECEALCTRLGIMVNGRFKCLGSIQHLKNRFGDGYMITVRTKTTASV------------- 2360

  Fly  1613 HFPMSPNKKFSAFMEIKFPDAVLTIERDDSMVFVLPLGTTTFSEIFLTLRKDAFEMNIEDYFITR 1677
                   |:...|....||:|:|.......:.:.|.....:.:::|..:.:....::||||.:::
Zfish  2361 -------KEVIRFFNRNFPEAILKERHHTKIQYQLKSENISLAQVFSKMEQVVEVLSIEDYSVSQ 2418

  Fly  1678 ----NMLVGF---QIFTYDQHQDNP 1695
                |:.|.|   |....:|.:.:|
Zfish  2419 TTLDNVFVNFAKKQSDNLEQQESSP 2443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1494NP_001259763.1 ABC2_membrane_3 <263..480 CDD:289468 47/225 (21%)
CcmA 541..848 CDD:224054 103/329 (31%)
ABC_subfamily_A 541..761 CDD:213230 73/219 (33%)
ABC2_membrane_3 911..>1189 CDD:289468 73/462 (16%)
ABC2_membrane <1080..>1188 CDD:304374 24/120 (20%)
ABC_subfamily_A 1370..1577 CDD:213230 51/206 (25%)
PRK14255 1371..1586 CDD:172743 50/214 (23%)
abca2XP_005165286.1 rim_protein 1..2435 CDD:130324 400/1965 (20%)
ABC_subfamily_A 1042..1261 CDD:213230 73/219 (33%)
ABC_subfamily_A 2118..2341 CDD:213230 54/240 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582273
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.940

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