DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1494 and abca2

DIOPT Version :10

Sequence 1:NP_608444.2 Gene:CG1494 / 33102 FlyBaseID:FBgn0031169 Length:1695 Species:Drosophila melanogaster
Sequence 2:XP_005165287.2 Gene:abca2 / 100006090 ZFINID:ZDB-GENE-050517-1 Length:2503 Species:Danio rerio


Alignment Length:1975 Identity:402/1975 - (20%)
Similarity:729/1975 - (36%) Gaps:571/1975 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 GFEDCEE-----MRESVIEN-GLFAGLCF----DGSPFVEDQVFEEDTLESYSNIQPMLNYTILL 180
            ||.|.|.     :.::..:| .:||.:.|    |||                  :.|.:.|.|..
Zfish   634 GFPDEESIVNYTLNQAYHDNVSVFASVIFQTNKDGS------------------LPPHVMYKIRQ 680

  Fly   181 PSELRMLDGDFRMANWMTLYNDDPNTFVLTRLNQPYEGGFVGYVREGFIRLQKSVSESFL-VLTS 244
            .|.......:.|.|.|    ...|||           ||.. |...||:.:|..:..:.: ....
Zfish   681 NSSFTEKTNEIRRAYW----RPGPNT-----------GGKF-YFLYGFVWIQDMIERAIINTFVG 729

  Fly   245 HKSL-PTIQIRRFPITGREQDPLMGNLNYGMPFIIIIGFLFPAQLFVWQVVSEKQSQVRQFLINM 308
            |..: |...::.||.....:|..:..:.:.||..::|.:::...:.:..:|:||:.::::.:..|
Zfish   730 HDVVEPGNYVQMFPYPCYTRDDFLFVIEHMMPLCMVISWVYSVAMMIQHIVAEKEQRLKEVMKMM 794

  Fly   309 NIGNLIHFVSWYLKGLIYEMISSLIIAALLKIRWDQDHG-VLTQTPWYILILVLFCYNCAAVAFA 372
            .:.|.:|:|:|::.|.:...||...:.|:||      :| ||..:..:|:.|.|..|..|.:.|.
Zfish   795 GLNNAVHWVAWFITGFVQLSISVTALTAILK------YGKVLLHSDPFIIWLFLTIYAVATIMFC 853

  Fly   373 IMVAAFFRNALNAVRVLTILWIMSYVPTFILSNNLEGNIHALRYVSYALPNVVATLVI-----EF 432
            .:|:..:..|..|.....|::.:||||...::...|.....:......:.::::|...     .|
Zfish   854 FLVSVLYSKAKLASACGGIIYFLSYVPYMYVAIREEVAHDKITAFEKCIASLMSTTAFGLGSKYF 918

  Fly   433 LIERESIVHITWEDSGYRLN---YDGGHITVTASSWIFMLNALVYCAIGLYVD------------ 482
            .:...:.|.|.|.    .:|   .:|....:..|..:..::|:||..:..|::            
Zfish   919 ALYEVAGVGIQWR----TINQSPVEGDDFNLLLSMVMLTIDAIVYGVLTWYIEAVHPGMYGLPRP 979

  Fly   483 --------MWRGGDRSGKKMKKP---NTNASVQEDPY-----HERGDSFTHQGQAIGVNSTKIYE 531
                    .|.|..|. :..:.|   .|..||.|:..     |.|.:            .|:..|
Zfish   980 WYFPLQKSYWLGSGRI-ETWEWPWGGGTRLSVMEEDQACAMEHRRSE------------ETRGIE 1031

  Fly   532 VEPSHRRFKLKIKKLCKRFATNDRPALNLFSWNVYENEVTVLMGHNGCGKSTLLKILAGLVEPSR 596
            .||:|....:.|.||.|.:.|..:.|||..|.|::||:|...:||||.||:|.:.||.||..|:.
Zfish  1032 EEPNHLPLVVCIDKLTKVYKTGSKLALNKLSLNLHENQVVSFLGHNGAGKTTTMSILTGLFPPTS 1096

  Fly   597 GTVMISSHNIQTERKAASMELGIAFGHDMLLTGFTVIDYLRFICRVKGLHNNIEIDGQSNYFLNV 661
            |:..|..|:|:||.:.....||:...|::|....:|.::|.|..|:||:... :|..:.:..:..
Zfish  1097 GSATIYGHDIRTEMERIRQNLGMCPQHNVLFDKLSVEEHLWFYSRLKGMAEE-DIRKEMDKMIED 1160

  Fly   662 LQIGGLKTKRIRTLTDRDLCLVSICCAFVGNSPIILIDDVHSDLDKRTQSLVWNLINEEKSKRTI 726
            |::...:...::||:......:|:..||||.|..:::|:..:.:|...:..:|:||.:.|..|||
Zfish  1161 LELSNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAVILDEPTAGVDPYARRAIWDLILKYKQGRTI 1225

  Fly   727 ILVSNSPALAENIADRMAIMSNGELKCTGTKPFLKNMYGHGYRLTCVKGKNYKRDELFGMMNSYM 791
            :|.::....|:.:.||:||:|:|:|||.|:..|||:.||.||:||.||.::   |......:|..
Zfish  1226 LLSTHHMDEADLLGDRIAIISHGKLKCCGSPLFLKSTYGDGYKLTLVKKQS---DSHTADQSSQS 1287

  Fly   792 PNMSIE---------------------RDIGYKVTFVLENKFEDQ--FPMLIDDLEENMQQLGVV 833
            |:.||.                     .|...::::||.::...:  |..|...||:::..|.:.
Zfish  1288 PSSSISPCSENRVTQFIRQYVASCLLVSDSNTELSYVLPSEAVKKGCFERLFQALEQSLDSLALT 1352

  Fly   834 SFRIRDTSMEEIFLRFGCED--------------------------------------------- 853
            ||.:.||::||:||:...||                                             
Zfish  1353 SFGVMDTTLEEVFLKVSEEDLSLENSDADMKDSPGGASAGKPSGLLGGPQCEGAPAAAVMRPEVE 1417

  Fly   854 ---------------------------NDQSGAF--------------QSHENAQVLLEEY--YS 875
                                       .|:.|.:              |..::|.:..||.  ..
Zfish  1418 LSNLMMCSRLSPSQASLQSGSSLGSVRGDEGGPYSEFYGDYCPLFDNGQDLDSASLRDEESSPQP 1482

  Fly   876 TLAEANEKGRRTGW--KLFFLHGRAVIYKRWIAAHRHWIVLIFEVLAMAL---VAVCTFSSIFIY 935
            |:.|.....:..||  ||...||  :|.||:..|.|:...:..::|..|.   ||:....|:...
Zfish  1483 TVLEGQGSFKLDGWWLKLRQFHG--LIVKRFHCAKRNTKGIFSQILLPAFFVCVAMTVALSVPEI 1545

  Fly   936 GKNYELEPLTFNLSQLH------------------------------------------------ 952
            |   :|.||..:.||.|                                                
Zfish  1546 G---DLPPLILSPSQYHNYTQPRGNFIPYANEDRSQYRTKFSPDAGPQRIVNTLRLPSGVGATCI 1607

  Fly   953 -------TVDAFVE---------------------LFSEEEDV---------------KDMHAYY 974
                   |:|...:                     |.|..:.|               .|..|::
Zfish  1608 LKTPFNSTLDQLAQTLNPYANNSKTLAARYFDSMCLDSFTQGVPLSNFVPPPPSPAPSDDPEAHF 1672

  Fly   975 TELLYWYDAHVAT---------------------------------------------------- 987
            .:.|:.|.|...|                                                    
Zfish  1673 EDGLWNYTAAPTTVREMATSPPTLPLSIHEPVRCICSMQGTGFSCPSGVGGRPPLMKVVTGDILV 1737

  Fly   988 -LTKNRHNAYALLTQNQFTAHVNSRYIFG-------ATFDQKI------------VTAWFNNIPL 1032
             :|....:.|.|.|.::...|....:..|       |:|.:|.            ....:||...
Zfish  1738 DITGRNVSEYLLYTSDRLRLHRYGGFTVGNIQKSVPASFGRKTPPMVRKIAVRRSSQVLYNNKGY 1802

  Fly  1033 HSAPYALNVVHNAVAR-HLFDEEAT-----IDVTLAPLPFRTAINTFPPSSHTFGGCLAFGICFV 1091
            ||.|..|||::||:.| :|...:..     |.||..|:...:|..:...........:|..|...
Zfish  1803 HSMPTYLNVLNNAILRANLPSSKGNPSAYGITVTNHPMNRTSASLSLDYLLQGTDVVIAIFIIVA 1867

  Fly  1092 LTFIWPAFAIYMITERGSLLKKQQFLAGVRVCSYWTFTVLYDLLFLLIFCACVVVMVALYENPNH 1156
            ::|:..:|.::::.|:.:..|..||::|....:||....::|:|..|:...|.|:::.:::.|.:
Zfish  1868 MSFVPASFVVFLVAEKSTKAKHLQFVSGCDPVTYWLANYIWDMLNYLVPATCCVLILFVFDLPAY 1932

  Fly  1157 D-----------VMLYGYISVTLML--GGFWVILLAYLMASLCRNPCYGFLWLCGIN-SIGLVCF 1207
            .           .:|||: |:|.::  ..||..:           |...:::|..|| .||:.. 
Zfish  1933 TSPTNFPAVLSLFLLYGW-SITPIMYPASFWFEV-----------PSTAYVFLIVINLFIGITA- 1984

  Fly  1208 SQFYRTHPESMLLEPTFMAMYTVATVICKLF-MIYEFKLICMDPVVNFTSVEVFKCNSIPNCC-- 1269
                                 ||||.:.:|| ...:.||:                ||....|  
Zfish  1985 ---------------------TVATFLLQLFERDKDLKLV----------------NSYLKSCFL 2012

  Fly  1270 IKSNYGTFTAGIYHDLVILTLLDIILLACLFVSEYHSILGFAD---------------------- 1312
            |..||     .:.|.|:.:...:       :::||::.:|..|                      
Zfish  2013 IFPNY-----NLGHGLMEMAYNE-------YINEYYAKIGQFDKVKSPFEWDIVTRGLVAMTIEG 2065

  Fly  1313 ---------CR-----------LDTRTNESPDSN---QESRAFPGILSNDTAAL--VDKEHTSRL 1352
                     |:           ::::..|..|.:   :..|...|...||...:  :.|.:.|| 
Zfish  2066 FVGFLITILCQYNFLRKAQRVPVNSQPVEDDDVDVACERRRVLRGDADNDMLKIDNLTKVYKSR- 2129

  Fly  1353 NEEERSKYAAVGIGIVSKYRRNRVLRDLDFTLAKSECLSITGANNSGKTTLLKVVVNETKMNAGQ 1417
                             |..|...:..|...:...||..:.|.|.:||||..|::..:.....|:
Zfish  2130 -----------------KMGRILAVDRLCLGVRPGECFGLLGVNGAGKTTTFKMLTGDESTTGGE 2177

  Fly  1418 LWIHDYSVNTHRVQCYRMVGYCPQKDSLPSEFTPRELLYIHAMLQGHRHRIGRELSEALLRLVGL 1482
            .:|.::|:....::..:.:|||||.|:|..:.|.||.|.::..|:|...:....:.:..|..:.|
Zfish  2178 AFIQEHSILRELLRVQQSIGYCPQFDALFDDLTAREHLELYTRLRGIPWKDEERVVQWALEKLEL 2242

  Fly  1483 TPCWNRSVRMCTTGQIRRLYFAYAVLGSPDLICVDGVPAGLDPTGKRIILMMTSTMQAMGSSFLY 1547
            :...::.....:.|..|:|..|.|::|.|.||.:|....|:||..:|.:..:...:...|.|.:.
Zfish  2243 SKYADKPAGTYSGGNKRKLSTAIALIGYPSLIFLDEPTTGMDPKARRFLWNLILDIIKTGRSVVL 2307

  Fly  1548 TMLTGLDAERLSLRTPLLLEGQLWMIRPMDTETENYKSGYQLEVRFKRKVNPNVSMSRATWNLIN 1612
            |..:..:.|.|..|..:::.|:...:..:......:..||.:.||.|...:.             
Zfish  2308 TSHSMEECEALCTRLGIMVNGRFKCLGSIQHLKNRFGDGYMITVRTKTTASV------------- 2359

  Fly  1613 HFPMSPNKKFSAFMEIKFPDAVLTIERDDSMVFVLPLGTTTFSEIFLTLRKDAFEMNIEDYFITR 1677
                   |:...|....||:|:|.......:.:.|.....:.:::|..:.:....::||||.:::
Zfish  2360 -------KEVIRFFNRNFPEAILKERHHTKIQYQLKSENISLAQVFSKMEQVVEVLSIEDYSVSQ 2417

  Fly  1678 ----NMLVGF---QIFTYDQHQDNP 1695
                |:.|.|   |....:|.:.:|
Zfish  2418 TTLDNVFVNFAKKQSDNLEQQESSP 2442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1494NP_608444.2 rim_protein <223..1689 CDD:130324 377/1860 (20%)
ABC_subfamily_A 541..761 CDD:213230 73/219 (33%)
abca2XP_005165287.2 None

Return to query results.
Submit another query.