DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1724 and Timm17b

DIOPT Version :9

Sequence 1:NP_608439.2 Gene:CG1724 / 33097 FlyBaseID:FBgn0031164 Length:185 Species:Drosophila melanogaster
Sequence 2:XP_038955701.1 Gene:Timm17b / 317374 RGDID:1561744 Length:199 Species:Rattus norvegicus


Alignment Length:191 Identity:101/191 - (52%)
Similarity:127/191 - (66%) Gaps:32/191 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEEYSREPCPFRIVDDCGGAFTMGCFGGGLFQGLKGFRNAPQGLKRRFAGGLAAVKSRSPTIGGN 65
            ||||:|||||:|||||||||||||..|||:||.:|||||||.|::.||.|.:.||:.|:|.|||:
  Rat     1 MEEYAREPCPWRIVDDCGGAFTMGVIGGGVFQAVKGFRNAPVGIRHRFRGSINAVRIRAPQIGGS 65

  Fly    66 FAAWGCVFSIVDCSLVHLRKKEDPWNSIMSGAIAGGILSSRN----------------------- 107
            ||.||.:||.:||.||.||.||||||||.|||:.|.:|::|:                       
  Rat    66 FAVWGGLFSTIDCGLVRLRGKEDPWNSITSGALTGAVLAARSECFQPLTPVLALFCLPFLSCVSF 130

  Fly   108 ----GVAAMFGSAIIGGVLLSMIEGVGILFTRISAEQFRNS-----DPQNDLGRAGAFASG 159
                |..||.|||::||:||::|||||||.||.:|:||||:     ||.....:.||.|.|
  Rat   131 CLPGGPLAMVGSAMMGGILLALIEGVGILLTRYTAQQFRNAPPFLEDPNQLTPKEGAPAPG 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1724NP_608439.2 Tim17 1..147 CDD:295283 96/177 (54%)
Timm17bXP_038955701.1 Tim17 1..198 CDD:413300 101/191 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166345898
Domainoid 1 1.000 168 1.000 Domainoid score I3719
eggNOG 1 0.900 - - E1_COG5596
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H135958
Inparanoid 1 1.050 225 1.000 Inparanoid score I3409
OMA 1 1.010 - - QHG54844
OrthoDB 1 1.010 - - D1590221at2759
OrthoFinder 1 1.000 - - FOG0001103
OrthoInspector 1 1.000 - - mtm8951
orthoMCL 1 0.900 - - OOG6_101935
Panther 1 1.100 - - O PTHR10485
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X753
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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