DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15445 and nub1

DIOPT Version :10

Sequence 1:NP_608436.4 Gene:CG15445 / 33094 FlyBaseID:FBgn0031161 Length:618 Species:Drosophila melanogaster
Sequence 2:NP_001107052.1 Gene:nub1 / 557021 ZFINID:ZDB-GENE-080212-11 Length:583 Species:Danio rerio


Alignment Length:628 Identity:175/628 - (27%)
Similarity:300/628 - (47%) Gaps:78/628 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 QNDNLLIQIRALLQSDGEKLWEEPYYSEDLGSIEGALENLAQKYSGMLGIDIGRCKFFLTELQEN 67
            :..:|..::.|||:.|..:||.|||.|....:....::.||:||:.::...:......|..::.:
Zfish     2 EEQHLQARLIALLRQDKIQLWLEPYRSLRDPADRLKIQELAEKYASVIQFPVEEVTSALESIRTD 66

  Fly    68 ALRTLAARREFSTTGIATLKVRRVGEHSGAT---MVEVKCSLDIVGSELQACIAKKLEVPNAAHV 129
            ..:.....:||..|.:||| |..:.:..|.|   .|:.|..|||...||:..|:::.   ...:.
Zfish    67 TSQKDEGNKEFKQTAVATL-VLHLPKEEGETKIKKVKFKTKLDITTQELKTQISQEF---GFTYF 127

  Fly   130 KCIAAGKVVSANATLADQQLKNNQQLIVI-VGDGDNSGEALYERINRIKADVE--------AVVS 185
            ..|..||::||...|.:|::|||.:::|: ....|...|...|.....:.|.|        .::|
Zfish   128 DLILCGKILSAERRLDEQKVKNNSKIMVMKTAPLDEKAEMKKEEEKTRRQDEELQKTHRGFQILS 192

  Fly   186 SKNN--------LIEMEDQNGSQVYLPPSEHKALLMGLGFCEKARAAMNRKHFEEALLLLLEADE 242
            .::.        .:|:.||.|:.:.:|..|.|||::.:||.|:.||.|.::....||..||.|:|
Zfish   193 ERDGSEDPSTTPFLEIADQKGNPLQIPDEERKALILAMGFHERGRALMKKRDHSAALSYLLRANE 257

  Fly   243 HFSTCGSKFLESVDNYALLNLDIVWCYFCLKNVTQLPDAEHRLARCSRNFGISYGDNLERLYSLK 307
            .|..|.|..|.:|||||:|.||:||||..|:.:..|.||:.||....|.|...||:...||..:|
Zfish   258 QFKKCNSAILHTVDNYAVLQLDVVWCYQALEQMECLDDAQERLEEAERCFQKCYGEKQSRLQQIK 322

  Fly   308 GKDCPERALIMRLKLLQGVIFFHQNLRNQAFECFEAAKTLLNELKINNDQLALLVDMGFEPSEAR 372
            |....|..|.:||.|||.|:.|.:...|||.:.....:.|.::|.::..:|..|.|.||...|||
Zfish   323 GHTGGEEVLFLRLHLLQTVLMFVKGNENQALDKLRDVEHLYSQLNLDPQKLQQLQDKGFSEQEAR 387

  Fly   373 MALRSCKGGTAVEQAVQFIHERRQQLKNARMKYKASERAMERRLKRSNSKDCTWVNPRSVCSLAD 437
            :.||:|:|.  |.:|...|.:|:::.:..::|.:...|   |||:..|             :|.:
Zfish   388 LGLRACRGD--VSEAENLISQRKKEKQVLKLKEQDKRR---RRLQDIN-------------TLVE 434

  Fly   438 MGFESGLATIALQRSNNDILQAVELLQTESDELTGASPWFPVTVDTTKLAQLLQLGFNENDSRVA 502
            :|||...|..||.::..|:.:|..:|...:|           ......|.|||.:||.::.:..|
Zfish   435 LGFERRDAQRALHQARGDVDKAYGMLLDAAD-----------AQHQVNLNQLLSMGFQKDMADSA 488

  Fly   503 LQNASNNMEEAIESLMCAIESEEELKAILKHVGRLAENGGQ-NLDGPSTSNASGQTQVALPAPII 566
            |:...:::::|.:.|   :|::..:.|.|:.....:.:..: :....||..:|.|.:..|...::
Zfish   489 LRMMRDDVQQATQLL---LENQAVIPADLQSPSPPSSSSEEPSTSSESTGGSSRQDEDLLVNELL 550

  Fly   567 EAVINHARVEIETYKAYERFNSDLKLSDLEYLDLPLIQEEKIL 609
            |.:..|                     :.:||||.|.:|:|::
Zfish   551 EDIPKH---------------------EEDYLDLTLDEEKKLI 572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15445NP_608436.4 Ubl_NUB1 82..159 CDD:340582 25/80 (31%)
UBA1_NUB1_like 354..391 CDD:270477 14/36 (39%)
UBA_like_SF 429..463 CDD:473871 9/33 (27%)
UBA_like_SF 484..519 CDD:473871 10/34 (29%)
nub1NP_001107052.1 Ubiquitin_5 73..157 CDD:436228 28/87 (32%)
UBA1_NUB1_like 369..404 CDD:270477 14/36 (39%)
UBA2_NUB1 427..461 CDD:270478 10/46 (22%)
UBA_like_SF 470..505 CDD:473871 10/37 (27%)

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