DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15445 and Nub1

DIOPT Version :9

Sequence 1:NP_001259756.1 Gene:CG15445 / 33094 FlyBaseID:FBgn0031161 Length:618 Species:Drosophila melanogaster
Sequence 2:XP_038963142.1 Gene:Nub1 / 296731 RGDID:1359489 Length:637 Species:Rattus norvegicus


Alignment Length:659 Identity:186/659 - (28%)
Similarity:314/659 - (47%) Gaps:95/659 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSQNDNLLIQIRALLQSDGEKLWEEPYYSEDLGSIEGALENLAQKYSGMLGIDIGRCKFFLTELQ 65
            |:|...|..::...|:.|..:||:.| |:|:...:..||::||::||..|.......:..:.|::
  Rat    25 MAQKKYLQAKLTQFLREDRIQLWKPP-YTEENKEVGLALKDLAKRYSERLECCENEVENIIEEIR 88

  Fly    66 ENALRTLAARREFSTTGIATLKV------RRVGEHSGATMVEVKCSLDIVGSELQACIAKKLEVP 124
            ..|:........:.||||||::|      |:    ...:::|.:  |.:.|.:|::.||:.... 
  Rat    89 CKAIERGTGNEHYRTTGIATIEVFLPPRLRK----DKKSLLETR--LHVTGRDLRSKIAETFGF- 146

  Fly   125 NAAHVKCIAAGKVVSANATLADQQLKNNQQLIV---------------IVGDGDNSGEALYERIN 174
            ...::|.:...|.:....:|.:|.:.:|.:.:|               :..:..|..|...:||.
  Rat   147 QENYIKIVINKKQLQLGKSLEEQGVTHNVKAMVLELKQSEEDVRRNLQLEEEEQNEAEQKEKRIQ 211

  Fly   175 RIKADVEAVVSSKNNLIEME--------DQNGSQVYLPPSEHKALLMGLGFCEKARAAMNRKHFE 231
            |.|..:|.:......:::.|        :|.|..:.:||||.|||::.:|:.||.||.:.||.:.
  Rat   212 RTKRGLEILAERAEMVVDPETMPYLDIANQTGRSIRIPPSERKALMLAMGYHEKGRAFLKRKEYG 276

  Fly   232 EALLLLLEADEHFSTCGSKFLESVDNYALLNLDIVWCYFCLKNVTQLPDAEHRLARCSRNFGISY 296
            .||..||:||.:|..| .:.|::|||||:|.||||||||.|:.:..|.|||.:|......|...|
  Rat   277 IALPCLLDADRYFCEC-KELLDTVDNYAVLQLDIVWCYFRLEQLECLDDAEKKLNLAQTCFTNCY 340

  Fly   297 GDNLERLYSLKGKDCPERALIMRLKLLQGVIFFHQNLRNQAFECFEAAKTLLNELKINNDQLALL 361
            |:|.:||.::||....|:.|.:||.||||:..:|.....:|.|....|:.|..||.|:..::..|
  Rat   341 GENHQRLVNIKGNCGKEKVLFLRLYLLQGIRNYHSGNGEEAREYLNKARQLFKELYIDPSKVHNL 405

  Fly   362 VDMGFEPSEARMALRSCKGGTAVEQAVQFIHERRQQLKNARMKYKASERAMERRLKRSNSKDCTW 426
            :.:||...|||:.||:|.|.  |:.|...|..||::|...|   |..:...:|||:         
  Rat   406 LQLGFTAQEARLGLRACDGN--VDHAATHISNRREELAQIR---KEEKEKRKRRLE--------- 456

  Fly   427 VNPRSVCSLADMGFESGLATIALQRSNNDILQAVELLQTESDELTGASPWFPVTVDTTKLAQLLQ 491
                ||.:|..||:.:..|..||.::..::..|:::|      |:....|:            ||
  Rat   457 ----SVNTLRGMGYSTQAAKQALHQARGNLDDALKIL------LSNPHMWW------------LQ 499

  Fly   492 LGFNENDSRVALQNASNNMEEAIESLMC----AIESEEELKAILKHV----GRLAENGGQNLDGP 548
            ...:||:||.|     :..:|:|:.|:.    .:.:|..|:....:|    ..||.:||..   |
  Rat   500 DSDSENNSRQA-----SPSQESIDQLVYMGFDTVVAEAALRVFAGNVQLAAQTLAHHGGSL---P 556

  Fly   549 STSNASGQTQVALP--APIIEAVINHARV--EIETYKAYERFNSDLKLSDLEYLDLPLIQEEKIL 609
            .....||:...:.|  :|...|..:.|..  ::|| :|......|:...:.:|||..|..||.|:
  Rat   557 PDLQFSGEDSSSTPSTSPSDSAGTSSASTDEDMET-EAVNEILEDIPEHEEDYLDSTLEDEEVII 620

  Fly   610 TEYFNMLQQ 618
            .||.:.:.:
  Rat   621 AEYLSYVDR 629

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15445NP_001259756.1 UBA1_NUB1_like 354..391 CDD:270477 12/36 (33%)
UBA_like_SF 429..463 CDD:304366 9/33 (27%)
UBA_like_SF 484..519 CDD:304366 10/34 (29%)
Nub1XP_038963142.1 Ubiquitin_5 94..187 CDD:407874 20/99 (20%)
UBA1_NUB1_like 398..433 CDD:270477 12/36 (33%)
UBA_like_SF 458..490 CDD:419673 9/37 (24%)
UBA3_NUB1 515..550 CDD:270479 7/34 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166350682
Domainoid 1 1.000 132 1.000 Domainoid score I4976
eggNOG 1 0.900 - - E1_KOG2561
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H41108
Inparanoid 1 1.050 220 1.000 Inparanoid score I3472
OMA 1 1.010 - - QHG48673
OrthoDB 1 1.010 - - D1339766at2759
OrthoFinder 1 1.000 - - FOG0005370
OrthoInspector 1 1.000 - - otm44819
orthoMCL 1 0.900 - - OOG6_106196
Panther 1 1.100 - - O PTHR12948
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4302
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1514.810

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