DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15446 and snai3

DIOPT Version :9

Sequence 1:NP_608430.2 Gene:CG15446 / 33088 FlyBaseID:FBgn0031155 Length:373 Species:Drosophila melanogaster
Sequence 2:NP_001070853.1 Gene:snai3 / 567724 ZFINID:ZDB-GENE-061013-757 Length:283 Species:Danio rerio


Alignment Length:222 Identity:43/222 - (19%)
Similarity:72/222 - (32%) Gaps:71/222 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   203 SQSDSMVNTNQGFTTNRNFIPILSSFPNPYRNMDVTWTEQFNALSNQYYNHIMNSISSLSQIQPL 267
            |:...|:::....:..:...|..:.||.|.......|               ||.|||...:.|.
Zfish    23 SKKHEMIHSESSNSKLKTLHPHQNMFPVPCYGNSAGW---------------MNPISSDIYMPPQ 72

  Fly   268 NSTPSANPPIFG--------ANPMVMGRHPPFSVFS--------------------CPL------ 298
            :.:...:.||.|        ::|: ....|..|:..                    .||      
Zfish    73 HPSLPIDDPILGLTYPLPAPSSPL-RDMRPALSMLEHTDPSSLQLSHRDLHEKVPVSPLGLTTTG 136

  Fly   299 ---DYCKENFDSRRAMYK-----HQRETGHHNWP----HNCSKCGQVFRTSGFMRMH---SVNAC 348
               ::..|.||.::|...     :||:. |..||    ..|..|.:.:.:.|.::||   ....|
Zfish   137 NSQEHSDECFDCQKAYLSFSNLANQRQV-HCQWPCHKYFTCKYCEKEYVSLGALKMHIRTHTLPC 200

  Fly   349 ARNLHKFKITKPNELQ-----QLGKKP 370
            ...|.....::|..||     ..|:||
Zfish   201 VCKLCGKAFSRPWLLQGHIRTHTGEKP 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15446NP_608430.2 None
snai3NP_001070853.1 C2H2 Zn finger 176..196 CDD:275368 5/19 (26%)
C2H2 Zn finger 202..222 CDD:275368 4/19 (21%)
zf-H2C2_2 215..238 CDD:290200 5/13 (38%)
zf-C2H2 228..250 CDD:278523 43/222 (19%)
C2H2 Zn finger 230..250 CDD:275368
C2H2 Zn finger 258..274 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2462
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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