DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15446 and Scrt1

DIOPT Version :9

Sequence 1:NP_608430.2 Gene:CG15446 / 33088 FlyBaseID:FBgn0031155 Length:373 Species:Drosophila melanogaster
Sequence 2:NP_001124042.1 Gene:Scrt1 / 366951 RGDID:1306236 Length:348 Species:Rattus norvegicus


Alignment Length:335 Identity:59/335 - (17%)
Similarity:105/335 - (31%) Gaps:66/335 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 RQLENDSWLSSD--------RLPMMVRHEIETRNKKQLMSKYNAETATHVFSHNGGPRRGRPPSA 121
            ::::.|::.|:|        |..:.||.:     .|..:|.|....:.:.........:|..|..
  Rat     8 KKVKLDTFSSADLDSSYGRARSDLGVRLQ-----DKGYLSDYVGPASVYDGDAEAALLKGPSPEP 67

  Fly   122 ATAARMASEFARQVGGISQSPTIEDEGK-------SGEQSVMQPKSKKANKMPDKVADKLATKSE 179
            ..||.:..|......|.:..||...|..       :|:.:|.:..:..|..:.|..:.:.|..:.
  Rat    68 MYAAAVRGELGPAASGSAPPPTPRPELATAAGGYINGDAAVSEGYAADAFFITDGRSRRKAANAN 132

  Fly   180 PKSEESNVPVKIKVE------GVEHNAEGSQSDSMVNTNQG------------------------ 214
            ..|..|...|.....      |......||.|.|...|..|                        
  Rat   133 AASAPSTASVAAPDSDAGGGGGPGTRGSGSGSASRGGTRVGAGTEARAGPGATGAGGRHACGECG 197

  Fly   215 --FTTNRNFIPILSSFPNPYRNMDVTWTEQFNALSNQYYNHIMNSISSLSQIQPLNSTPSANPPI 277
              :.|:.|    ||.....:|::|.....:.......|.:  |.:::.......|..........
  Rat   198 KTYATSSN----LSRHKQTHRSLDSQLARRCPTCGKVYVS--MPAMAMHLLTHDLRHKCGVCGKA 256

  Fly   278 FGANPMVMGR---HPPFSVFSCPLDYCKENFDSRRAMYKHQRETGHHNWPH-NCSKCGQVFRTSG 338
            |....::.|.   |.....|.|.  :|.:.|..|..:..|.:.  |..:.| .|.:|.:.|....
  Rat   257 FSRPWLLQGHMRSHTGEKPFGCA--HCGKAFADRSNLRAHMQT--HSAFKHFQCKRCKKSFALKS 317

  Fly   339 FMRMHSVNAC 348
            ::..|..:||
  Rat   318 YLNKHYESAC 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15446NP_608430.2 None
Scrt1NP_001124042.1 C2H2 Zn finger 193..213 CDD:275368 4/23 (17%)
C2H2 Zn finger 224..241 CDD:275371 2/18 (11%)
COG5048 <245..>313 CDD:227381 14/71 (20%)
C2H2 Zn finger 250..270 CDD:275368 2/19 (11%)
C2H2 Zn finger 278..298 CDD:275368 5/23 (22%)
C2H2 Zn finger 306..322 CDD:275368 3/15 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2462
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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