DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15446 and Scrt2

DIOPT Version :9

Sequence 1:NP_608430.2 Gene:CG15446 / 33088 FlyBaseID:FBgn0031155 Length:373 Species:Drosophila melanogaster
Sequence 2:NP_001178834.1 Gene:Scrt2 / 366229 RGDID:1564796 Length:305 Species:Rattus norvegicus


Alignment Length:53 Identity:17/53 - (32%)
Similarity:22/53 - (41%) Gaps:9/53 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   296 CPLDYCKENFDSRRAMYKHQRETGHHNWPHNCSKCGQVFR----TSGFMRMHS 344
            ||.  |.:.:.|..|:..|...   ||..|.|..||:.|.    ..|.||.|:
  Rat   188 CPT--CGKAYVSMPALAMHVLT---HNLRHKCGVCGKAFSRPWLLQGHMRSHT 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15446NP_608430.2 None
Scrt2NP_001178834.1 C2H2 Zn finger 157..177 CDD:275368
COG5048 <210..>277 CDD:227381 9/26 (35%)
zf-C2H2 212..234 CDD:278523 8/21 (38%)
C2H2 Zn finger 214..234 CDD:275368 7/19 (37%)
zf-H2C2_2 227..250 CDD:290200 4/9 (44%)
C2H2 Zn finger 242..262 CDD:275368
zf-C2H2 242..262 CDD:278523
zf-H2C2_2 254..278 CDD:290200
C2H2 Zn finger 270..286 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2462
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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