DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15446 and scrt2

DIOPT Version :9

Sequence 1:NP_608430.2 Gene:CG15446 / 33088 FlyBaseID:FBgn0031155 Length:373 Species:Drosophila melanogaster
Sequence 2:NP_998802.1 Gene:scrt2 / 325372 ZFINID:ZDB-GENE-030131-4097 Length:312 Species:Danio rerio


Alignment Length:327 Identity:65/327 - (19%)
Similarity:114/327 - (34%) Gaps:74/327 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 PVSYRQMANQSRRQLENDSWLSSDRLPMMVR-----------HEIETRNKKQLMSKYNAETATHV 106
            |||.....:.:.|.:: ||: |..|..:.||           ...|...:||...|.|:|.....
Zfish    19 PVSNHHHHHHNDRHMD-DSF-SRSRSSLGVRLCENGYIKDYISSSEYTEEKQADMKLNSELLYSP 81

  Fly   107 FSHNGG----PRRGRPPSAATAARMASEFARQVGGISQSPTIE----DEGKS---GEQSVMQPKS 160
            .|..||    |....|.|..:.......|:.:...:|:..|::    .:|:|   ||.|    ::
Zfish    82 VSSGGGEYCQPDLEHPDSPQSGLTARGYFSSESESLSEGYTMDAFFISDGRSRRKGEVS----EA 142

  Fly   161 KKANKMPDKVADKLATKSEPKSEESNVPVKIKVEGVEHNAEGSQSDSMVNTNQGFTTNRNFIPIL 225
            .||:::..:|                  |.:...|..|...        ...:.:.|:.|    |
Zfish   143 AKADEVEKEV------------------VGVNNGGARHTCN--------ECGKTYATSSN----L 177

  Fly   226 SSFPNPYRNMDVTWTEQFNALSNQYYN------HIMNSISSLSQIQPLNSTPSANPPIFGANPMV 284
            |.....:|::|.....:.......|.:      ||:.  ..|.....:.|...:.|.:...:   
Zfish   178 SRHKQTHRSLDSKMARKCPTCDKVYVSMPALAMHILT--HDLKHKCHVCSKAFSRPWLLQGH--- 237

  Fly   285 MGRHPPFSVFSCPLDYCKENFDSRRAMYKHQRETGHHNWPH-NCSKCGQVFRTSGFMRMHSVNAC 348
            |..|.....|:|.  :|.:.|..|..:..|.:.  |..:.| :|.:|.:.|....::..|..:||
Zfish   238 MRSHTGEKPFACA--HCGKAFADRSNLRAHMQT--HSAFKHYSCKRCNKTFALKSYLNKHYESAC 298

  Fly   349 AR 350
            .|
Zfish   299 FR 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15446NP_608430.2 None
scrt2NP_998802.1 zf-C2H2 162..184 CDD:278523 5/33 (15%)
C2H2 Zn finger 164..184 CDD:275368 4/31 (13%)
C2H2 Zn finger 195..212 CDD:275371 1/16 (6%)
COG5048 219..>295 CDD:227381 16/82 (20%)
zf-C2H2 219..241 CDD:278523 3/24 (13%)
C2H2 Zn finger 221..241 CDD:275368 3/22 (14%)
zf-H2C2_2 234..257 CDD:290200 5/27 (19%)
zf-C2H2 247..269 CDD:278523 6/25 (24%)
C2H2 Zn finger 249..269 CDD:275368 5/23 (22%)
C2H2 Zn finger 277..293 CDD:275368 3/15 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2462
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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