DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15446 and Snai3

DIOPT Version :9

Sequence 1:NP_608430.2 Gene:CG15446 / 33088 FlyBaseID:FBgn0031155 Length:373 Species:Drosophila melanogaster
Sequence 2:XP_006531137.1 Gene:Snai3 / 30927 MGIID:1353563 Length:327 Species:Mus musculus


Alignment Length:134 Identity:29/134 - (21%)
Similarity:43/134 - (32%) Gaps:52/134 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   264 IQPLNSTPSANPPIFGANPMV------------------------------MGRH-------PPF 291
            :.||...|:..|||.|.:..:                              :.||       |..
Mouse   111 LPPLLVLPTRWPPILGPDGALNEHLRAEGTSRVPGSFECIHCHRPYHTLAGLARHQQLHCHLPTG 175

  Fly   292 SVFSCPLDYCKENFDSRRAMYKHQRETGHHNWPHNCSKCGQVFR----TSGFMRMH------SVN 346
            ..|:|  .||.:.:.|..|:..|.|.   |..|..|..||:.|.    ..|.:|.|      :.:
Mouse   176 RAFTC--RYCDKEYASLGALKMHIRT---HTLPCICKVCGKAFSRPWLLQGHIRTHTGEKPYTCS 235

  Fly   347 ACAR 350
            .|:|
Mouse   236 HCSR 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15446NP_608430.2 None
Snai3XP_006531137.1 C2H2 Zn finger 149..169 CDD:275368 2/19 (11%)
C2H2 Zn finger 180..200 CDD:275368 7/24 (29%)
C2H2 Zn finger 206..226 CDD:275368 6/19 (32%)
zf-C2H2 206..226 CDD:333835 6/19 (32%)
zf-H2C2_2 219..242 CDD:372612 5/21 (24%)
zf-C2H2 232..254 CDD:333835 2/8 (25%)
C2H2 Zn finger 234..254 CDD:275368 2/6 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2462
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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