DRSC/TRiP Functional Genomics Resources

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Protein Alignment bves and popdc2

DIOPT Version :10

Sequence 1:NP_608426.1 Gene:bves / 33083 FlyBaseID:FBgn0031150 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_001018636.1 Gene:popdc2 / 793666 ZFINID:ZDB-GENE-060518-2 Length:370 Species:Danio rerio


Alignment Length:275 Identity:85/275 - (30%)
Similarity:136/275 - (49%) Gaps:33/275 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 INPGDWS-IEQCLGPHHL-----------YFQLGWAFLFLAFLAPHGPYGALWMRAMLLIGCLMM 137
            :|.||.| |:..:..|.|           .:.||...|||.::...|.||||::.:.|....|.:
Zfish     1 MNSGDSSLIDAVIYNHTLCDGWTNSTEGAIYHLGNTILFLGYMGGSGAYGALYIFSFLAPAFLCL 65

  Fly   138 GMHGYLVAFAPDVILWSGMGLFVNFIYLVVVLCRL-----RPVRFEQEIEAVYLALFQPLHVTRH 197
            .:.|:|.....||.:|:    .:..:..:..:|.|     |.....:|..|:|.|::.||.|...
Zfish    66 ALWGWLTMCGLDVFIWN----LLLMLQCLAQVCHLIFRLMRDGLANEEFSALYTAVYLPLDVPVQ 126

  Fly   198 QFKKVLNC--MKVIRALKYQEVYAQEKVTKVDSLSLVLSGKLVVSQHQRALHIVFPHQFLDSPEW 260
            .||::...  .||: :|..:|.||.|..|.:|.||.:|||::.||...:.||.:|||||||||||
Zfish   127 VFKEITGAGENKVL-SLAAEETYAVEGKTPIDQLSFLLSGRIRVSLEGQFLHYIFPHQFLDSPEW 190

  Fly   261 FGV--STDDYFQVSIMAMEESRVLIWHRDKLKLSIMAEPFLQTVFDHILGRDVVKKLMQVTQVSE 323
            ..:  :.:..|||::.|..:.|.:.|.|.:|.|.:..:.::..:|..:||.|:..||..:.  .:
Zfish   191 ESLRPAEEGNFQVTLTAETDCRYISWRRRRLYLLLSKDRYIARLFSVMLGSDIADKLYSLN--DK 253

  Fly   324 SIASNGF-----LPS 333
            ..|.:|.     |||
Zfish   254 LFAKSGVRLDIRLPS 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bvesNP_608426.1 Popeye 98..320 CDD:461448 75/241 (31%)
popdc2NP_001018636.1 Popeye 26..253 CDD:461448 73/233 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 275..349
Blue background indicates that the domain is not in the aligned region.

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