DRSC/TRiP Functional Genomics Resources

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Protein Alignment bves and Popdc2

DIOPT Version :10

Sequence 1:NP_608426.1 Gene:bves / 33083 FlyBaseID:FBgn0031150 Length:414 Species:Drosophila melanogaster
Sequence 2:XP_006522501.1 Gene:Popdc2 / 64082 MGIID:1930150 Length:384 Species:Mus musculus


Alignment Length:279 Identity:79/279 - (28%)
Similarity:132/279 - (47%) Gaps:38/279 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 SAAGTLIAQSTAGTSAASSGTITWDNNGTLRSINPGDWSIEQCLGPHHLYFQLGWAFLFLAFLAP 117
            ||.|:.:||            :.| .....||..|   .:|..:      :.|...||.:.|:|.
Mouse     2 SANGSSVAQ------------LLW-QPPVCRSWKP---DVEGAV------YHLANCFLLMGFMAG 44

  Fly   118 HGPYGALWMRAMLLIGCLMMGMHGYLVAFAPDVILWSGMGLFVNFIYLVVVLCRLRPVRFEQEIE 182
            .|.||..::..:|..|.|...:.|:..|...|::||:.:......:.|..::.|:|.....:|..
Mouse    45 SGVYGCFYLFGILGPGYLCCVLWGWFDACGLDIVLWNVLLTVACLLQLAQLVYRVRVNTLPEEFN 109

  Fly   183 AVYLALFQPLHVTRHQFKKVLNCM-KVIRALKYQEVYAQEKVTKVDSLSLVLSGKLVVSQHQRAL 246
            .:|..|..||.|....:|::::|. :.:..|..::.||.|..|.::.|||:|||::.|||..:.|
Mouse   110 LLYRTLCLPLQVPLQVYKEIVHCCHEQVLTLATEQTYAVEGETPINRLSLLLSGRVRVSQDGQFL 174

  Fly   247 HIVFPHQFLDSPEWFGV--STDDYFQ-------------VSIMAMEESRVLIWHRDKLKLSIMAE 296
            |.:||:||:|||||..:  |.:..||             |::.|..|...:.|.|..|.|.:..|
Mouse   175 HYIFPYQFMDSPEWESLHPSEEGTFQVIRSPEAAQSPATVTLTAETECSYISWPRKNLYLLLNRE 239

  Fly   297 PFLQTVFDHILGRDVVKKL 315
            .::..:|..:||.|:.:||
Mouse   240 RYISRLFSALLGYDISEKL 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bvesNP_608426.1 Popeye 98..320 CDD:461448 69/234 (29%)
Popdc2XP_006522501.1 Popeye 26..264 CDD:461448 70/239 (29%)

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