DRSC/TRiP Functional Genomics Resources

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Protein Alignment bves and popdc3

DIOPT Version :10

Sequence 1:NP_608426.1 Gene:bves / 33083 FlyBaseID:FBgn0031150 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_001016293.1 Gene:popdc3 / 549047 XenbaseID:XB-GENE-6257868 Length:289 Species:Xenopus tropicalis


Alignment Length:276 Identity:80/276 - (28%)
Similarity:138/276 - (50%) Gaps:22/276 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 WSIEQCLGPHHLYFQLGWAFLF-LAFLAPHGPYGALWMRAMLLIGCLMMGMHGYLVAFAPDVILW 153
            |.:|.....:||.     :.|| |..:...|.:|.|::.....|..|...:..::...|.||..|
 Frog    21 WKLEAEGSIYHLA-----SVLFVLGCMGGSGYFGLLYVYIFFAISFLCTSIWAWMDVCAADVFSW 80

  Fly   154 SGMGLFVNFIYLVVVLCRLRPVRFEQEIEAVYLALFQPLHVTRHQFKKVLN-CMKVIRALKYQEV 217
            :.:.|.:..:.::.:..:||.|.|::|.:.||.|:|:||.::...|:|::: |...:..|:....
 Frog    81 NFILLVICIVQIIHLAYQLRSVTFDKEFQDVYSAVFKPLGISLTIFRKIISYCNAEVVTLERDHC 145

  Fly   218 YAQEKVTKVDSLSLVLSGKLVVSQHQRALHIVFPHQFLDSPEWFGV--STDDYFQVSIMAMEESR 280
            ||.:..|.:|.|||::||::.|:.....||.:||.||||||||..:  |.:..|||::.|..:.|
 Frog   146 YAVQGKTPIDKLSLLVSGRIRVTVDGEFLHYIFPLQFLDSPEWDSLKPSEEGIFQVTLTAETKCR 210

  Fly   281 VLIWHRDKLKLSIMAEPFLQTVFDHILGRDVVKKLMQVTQVSESIASNGF-----LPSGGYAEDA 340
            .:.|.|.||.|......||..:|..::..|:..||..:.  .:....:||     ||: .|....
 Frog   211 YVTWRRKKLYLLFAKHRFLAKLFSLLISSDIADKLYALN--DKVFIDSGFRFDIRLPN-YYHRAV 272

  Fly   341 EDK-----PMLILKKS 351
            .|:     |::.::||
 Frog   273 PDQAPSTVPIIRIQKS 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bvesNP_608426.1 Popeye 98..320 CDD:461448 69/225 (31%)
popdc3NP_001016293.1 Popeye 25..251 CDD:461448 69/232 (30%)

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