DRSC/TRiP Functional Genomics Resources

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Protein Alignment bves and popdc3

DIOPT Version :10

Sequence 1:NP_608426.1 Gene:bves / 33083 FlyBaseID:FBgn0031150 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_001001848.1 Gene:popdc3 / 415108 ZFINID:ZDB-GENE-040624-10 Length:298 Species:Danio rerio


Alignment Length:267 Identity:77/267 - (28%)
Similarity:124/267 - (46%) Gaps:24/267 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 PHHLYFQLGWAFLFLAFLAPHGPYGALWMRAMLLIGCLMMGMHGYLVAFAPDVILWSGMGLFVNF 162
            |....|.|....|.|.|:...|.||.|:|...|.:|.....:..:......|...|:    |..|
Zfish    26 PEGSVFHLAHILLVLGFMGGSGFYGLLYMFCFLTLGFFCYSIWAWSDPCTTDSFSWT----FALF 86

  Fly   163 IY----LVVVLCRLRPVRFEQEIEAVYLALFQPLHVTRHQFKKVL-NCMKVIRALKYQEVYAQEK 222
            .:    |:.|..|||.|.||:|.:.:|..||:.|.|:...|.|:: :|...:..::....:|.|.
Zfish    87 AFCLGQLIHVAYRLRSVTFEKEFQDLYECLFKKLGVSLIHFGKIVESCEGDVHTIEKDHFFAMEG 151

  Fly   223 VTKVDSLSLVLSGKLVVSQHQRALHIVFPHQFLDSPEWFGV--STDDYFQVSIMAMEESRVLIWH 285
            .|.:|.||:::||::.|:.:...||.::|.||||||||..:  |.:.:|||::.|....|.:.|.
Zfish   152 KTPIDKLSVLVSGRIRVTVNGEFLHFIYPFQFLDSPEWDSLRPSEEGFFQVTLRADIRCRYVAWR 216

  Fly   286 RDKLKLSIMAEPFLQTVFDHILGRDVVKKLMQVTQVSESIAS-----------NGFLPSGGYAED 339
            |.||.|......::..:|..::..|:.:||..:...:..|..           ||  |....|..
Zfish   217 RKKLYLLFAQHRYIAKIFALLVRNDIAEKLFSLNDKAFDIRGFRYDLRLPSFCNG--PGPEIANT 279

  Fly   340 AEDKPML 346
            .|.:|:|
Zfish   280 NESRPVL 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bvesNP_608426.1 Popeye 98..320 CDD:461448 69/228 (30%)
popdc3NP_001001848.1 Popeye 26..252 CDD:461448 69/229 (30%)

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