DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Stt3A and Stt3B

DIOPT Version :9

Sequence 1:NP_001259751.2 Gene:Stt3A / 33082 FlyBaseID:FBgn0031149 Length:713 Species:Drosophila melanogaster
Sequence 2:NP_524494.1 Gene:Stt3B / 43005 FlyBaseID:FBgn0011336 Length:774 Species:Drosophila melanogaster


Alignment Length:717 Identity:417/717 - (58%)
Similarity:532/717 - (74%) Gaps:40/717 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 LVKLAILILAAVLSFATRLFSVLRFESVIHEFDPYFNYRTTRFLAEQGFYKFHNWFDDRAWYPLG 85
            |:..|||::|.:..|::|||:|:||||:||||||:||||.|.::.:.|:|.|.||||:|||||||
  Fly    18 LITFAILLIAWLAGFSSRLFAVIRFESIIHEFDPWFNYRATAYMVQNGWYNFLNWFDERAWYPLG 82

  Fly    86 RIIGGTIYPGLMLTSAALYRLMWLLNVTIDIRNVCVFLAPFFSSLTTLVTYALTKEIHSTGAGLV 150
            ||:|||:|||||:||..::.|:.:||:.:.||::||||||.||.||::.||.||||:.|.||||.
  Fly    83 RIVGGTVYPGLMITSGGIHWLLHVLNIPVHIRDICVFLAPIFSGLTSISTYLLTKELWSAGAGLF 147

  Fly   151 AAALISIVPGYISRSVAGSYDNEGIAIFCMLFTYYLWIKAVKTGTIFWSAMSALAYFYMVSSWGG 215
            ||:.|:||||||||||||||||||||||.:.|||:||:::||||::||||.:||:||||||:|||
  Fly   148 AASFIAIVPGYISRSVAGSYDNEGIAIFALQFTYFLWVRSVKTGSVFWSAAAALSYFYMVSAWGG 212

  Fly   216 YVFLINLIPLHVLALMITGRFSHRIYIAYSTLYCVGTILSMQISFVGFQPIQSSEHMLALGTFGL 280
            |||:||||||||..|:|.||:|.|:..:|||.|.:|.:.||||.|||||||::||||.|||.|.|
  Fly   213 YVFIINLIPLHVFVLLIMGRYSPRLLTSYSTFYILGLLFSMQIPFVGFQPIRTSEHMAALGVFVL 277

  Fly   281 CQIHAFVDYLRSRIPKDHFDLLFKTLVSSVL--TVVFVVGTLLTLTGKVSPWTGRFYSLLDPSYA 343
            ....|.:.:|:|.:.::.|..||  :|..:|  ..|||...:||:.|.|:||:||||||.|..||
  Fly   278 LMAVATLRHLQSVLSRNEFRKLF--IVGGLLVGVGVFVAVVVLTMLGVVAPWSGRFYSLWDTGYA 340

  Fly   344 KNHIPIIASVSEHQPTSWSSFYFDLQILVFLFPAGLYFCFSKLTDSNIFIILYGVTSIYFAGVMV 408
            |.||||||||||||||:|.||:|||.|||..||.|:::|..::.|..:|::||.::::|||||||
  Fly   341 KIHIPIIASVSEHQPTTWFSFFFDLHILVCAFPVGVWYCIKQINDERVFVVLYAISAVYFAGVMV 405

  Fly   409 RLMLVLAPVMCVLSGIAISHLLAKYIKSVDAGSSSKQG---------------VESKRQHKKL-- 456
            ||||.|.||:|:|:|:|.|.||..:::.   .||.:.|               :|.|..:.|.  
  Fly   406 RLMLTLTPVVCMLAGVAFSGLLDVFLQE---DSSKRMGTAISAATEVDEAEDSIEKKTLYDKAGK 467

  Fly   457 --------EQQTGGVKSEVAIGFVGVITLMLIVYTLHCTWVTSEAYSSPSIVLS-ARSHDGGRII 512
                    .||..||.|.:....:..:.::|:::.:|||||||.|||||||||: ..|.||.|.|
  Fly   468 LKHRTKHDAQQDTGVSSNLKSIVILAVLMLLMMFAVHCTWVTSNAYSSPSIVLAFHNSQDGSRNI 532

  Fly   513 FDDFREAYYWLQMNTPEDARIMSWWDYGYQITAMANRTILVDNNTWNNTHISRVGQAMASSEEKA 577
            .||||||||||..||.:|||:||||||||||..|||||.|||||||||:||:.||:||:|:|||:
  Fly   533 LDDFREAYYWLSQNTADDARVMSWWDYGYQIAGMANRTTLVDNNTWNNSHIALVGKAMSSTEEKS 597

  Fly   578 YEIMRELDVDYVLVIFGGLTGYSSDDINKFLWMVRIGGSTDRGAH---IREKDYYAANGEFRVDK 639
            ||||..||||||||||||:.|||.||||||||||||.    .|.|   |:|.||:...||||||.
  Fly   598 YEIMTSLDVDYVLVIFGGVIGYSGDDINKFLWMVRIA----EGEHPKDIKESDYFTDRGEFRVDA 658

  Fly   640 EGSPTLLNCLMYKMCYYRFGQMYTEGGKAQGYDRVRAAEIGNKDFELDVMEEAYTTEHWLVRIYK 704
            ||:|.||||||||:.|||||::..:.....||||.|.|.||||||:|..:||||||||||||||:
  Fly   659 EGAPALLNCLMYKLSYYRFGELKLDYRGPSGYDRTRNAVIGNKDFDLTYLEEAYTTEHWLVRIYR 723

  Fly   705 VK 706
            ||
  Fly   724 VK 725

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Stt3ANP_001259751.2 Stt3 19..712 CDD:224206 417/717 (58%)
STT3 21..495 CDD:280649 267/500 (53%)
Stt3BNP_524494.1 Stt3 10..768 CDD:224206 417/717 (58%)
STT3 18..514 CDD:280649 267/500 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45447380
Domainoid 1 1.000 251 1.000 Domainoid score I401
eggNOG 1 0.900 - - E1_COG1287
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 787 1.000 Inparanoid score I71
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D111618at33208
OrthoFinder 1 1.000 - - FOG0001875
OrthoInspector 1 1.000 - - otm46857
orthoMCL 1 0.900 - - OOG6_100521
Panther 1 1.100 - - P PTHR13872
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1409
SonicParanoid 1 1.000 - - X1235
1211.830

Return to query results.
Submit another query.