DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rnf150 and meu34

DIOPT Version :10

Sequence 1:XP_017168354.1 Gene:Rnf150 / 330812 MGIID:2443860 Length:450 Species:Mus musculus
Sequence 2:NP_593329.1 Gene:meu34 / 2543036 PomBaseID:SPAC3A12.03C Length:309 Species:Schizosaccharomyces pombe


Alignment Length:268 Identity:61/268 - (22%)
Similarity:94/268 - (35%) Gaps:94/268 - (35%)


- Green bases have known domain annotations that are detailed below.


Mouse   194 IGTRNLQKYVSRTSVVFVSISFIVLMIISLAWLVFYYIQRFRYANA-------RDRNQYTIATGQ 251
            |.:|..:..||:.     ::|.|.|.|..:.||.    :|..:|..       |..||..|..||
pombe    94 IPSRRRRSVVSKE-----ALSCISLEIPYIKWLK----KRKGHAKGESTFLDNRSENQSVIVQGQ 149

Mouse   252 --------DWQLYRRRLGDAA----KKAISKLQVRTIRKGDK-------ETESDFDNCAVCIEGY 297
                    .:.:.|..||..:    ..|:|.:.......||.       |.|.||  |.:|...|
pombe   150 GETPSVIITYDVRRPNLGSTSFVEMSSALSNIYNTDASDGDSSDDSCLLEDEEDF--CIICYADY 212

Mouse   298 KPNDVVRILPCRHLFHKSCVDPWLLDHR-TCPMCKMNILKALGIPPNADCMDDLPIDFEGSLGGP 361
            ..:|::|:|||.|:||..|:|.|:...: :||:|..:..|..                       
pombe   213 AFDDILRVLPCEHVFHTQCIDTWMTTMKASCPLCNEDYYKYF----------------------- 254

Mouse   362 PTNQITGASDTTVNES--SVTLDPAVRTVGALQVVQDPDPAPQEGEAIFTTNSGQEPALSSDSDI 424
              .|:..||..|...:  |:.|.|                             |.....|:::|.
pombe   255 --LQMDAASSVTHENAAWSIPLSP-----------------------------GDSRTHSAETDR 288

Mouse   425 SLIMALEV 432
            ||:.|:.|
pombe   289 SLLSAMSV 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rnf150XP_017168354.1 PA_GRAIL_like 45..192 CDD:239037
RING-H2_RNF150 282..336 CDD:438456 21/54 (39%)
meu34NP_593329.1 RING-H2_RNF11 204..247 CDD:438131 17/44 (39%)
Blue background indicates that the domain is not in the aligned region.

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