DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cbs and cysM

DIOPT Version :10

Sequence 1:NP_608424.1 Gene:Cbs / 33081 FlyBaseID:FBgn0031148 Length:522 Species:Drosophila melanogaster
Sequence 2:NP_416916.1 Gene:cysM / 946888 ECOCYCID:EG10193 Length:303 Species:Escherichia coli


Alignment Length:288 Identity:110/288 - (38%)
Similarity:152/288 - (52%) Gaps:32/288 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 EVIGCTPLVKLNNIPASDGIECEMYAKCEFLNPGGSVKDRIGYRMVQDAEEQGLLKPGYTIIEPT 115
            :.||.||||||..:...:|  .|::.|.|..||.||||||....|:.:||::|.:|||..:||.|
E. coli     6 QTIGNTPLVKLQRMGPDNG--SEVWLKLEGNNPAGSVKDRAALSMIVEAEKRGEIKPGDVLIEAT 68

  Fly   116 SGNTGIGLAMACAVKGYKCIIVMPEKMSNEKVSALRTLGAKIIRTPTEAAYDSPEGLIYVAQQLQ 180
            ||||||.|||..|:|||:..::||:.||.|:.:|:|..||::|....|...:.       |:.|.
E. coli    69 SGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEG-------ARDLA 126

  Fly   181 RETPN---SIVLDQYRNAGNPLAHYDGTAAEILWQLDNKVDMIVVSAGTAGTISGIGRKIKEQVP 242
            .|..|   ..:|||:.|..||.|||..|..||..|...::...|.|.||.|||:|:.|.::||..
E. coli   127 LEMANRGEGKLLDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSK 191

  Fly   243 SCQIVGVDP-YGSILARPAELNKTDVQFYEVEGI---GYDFPPTVFDDTVVDVWTKIGDSDCFPM 303
            ...|||:.| .||                .:.||   ..::.|.:|:.::||....|...|....
E. coli   192 PVTIVGLQPEEGS----------------SIPGIRRWPTEYLPGIFNASLVDEVLDIHQRDAENT 240

  Fly   304 SRRLNAEEGLLCGGSSGGAMHAALEHAR 331
            .|.|...||:.||.|||||:..||..|:
E. coli   241 MRELAVREGIFCGVSSGGAVAGALRVAK 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CbsNP_608424.1 cysta_beta 45..505 CDD:273464 110/288 (38%)
cysMNP_416916.1 cysM 1..294 CDD:236972 110/288 (38%)

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