DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cbs and CBS

DIOPT Version :9

Sequence 1:NP_001285508.1 Gene:Cbs / 33081 FlyBaseID:FBgn0031148 Length:522 Species:Drosophila melanogaster
Sequence 2:XP_011528076.1 Gene:CBS / 875 HGNCID:1550 Length:582 Species:Homo sapiens


Alignment Length:465 Identity:240/465 - (51%)
Similarity:314/465 - (67%) Gaps:26/465 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 CEMYAKCEFLNPGGSVKDRIGYRMVQDAEEQGLLKPGYTIIEPTSGNTGIGLAMACAVKGYKCII 136
            |...|||||.|.||||||||..||::|||..|.||||.|||||||||||||||:|.||:||:|||
Human   120 CRGVAKCEFFNAGGSVKDRISLRMIEDAERDGTLKPGDTIIEPTSGNTGIGLALAAAVRGYRCII 184

  Fly   137 VMPEKMSNEKVSALRTLGAKIIRTPTEAAYDSPEGLIYVAQQLQRETPNSIVLDQYRNAGNPLAH 201
            |||||||:|||..||.|||:|:||||.|.:||||..:.||.:|:.|.|||.:|||||||.|||||
Human   185 VMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRLKNEIPNSHILDQYRNASNPLAH 249

  Fly   202 YDGTAAEILWQLDNKVDMIVVSAGTAGTISGIGRKIKEQVPSCQIVGVDPYGSILARPAELNKTD 266
            ||.||.|||.|.|.|:||:|.|.||.|||:||.||:||:.|.|:|:||||.|||||.|.|||:|:
Human   250 YDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDPEGSILAEPEELNQTE 314

  Fly   267 VQFYEVEGIGYDFPPTVFDDTVVDVWTKIGDSDCFPMSRRLNAEEGLLCGGSSGGAMHAALEHAR 331
            ...||||||||||.|||.|.||||.|.|..|.:.|..:|.|.|:||||||||:|..:..|::.|:
Human   315 QTTYEVEGIGYDFIPTVLDRTVVDKWFKSNDEEAFTFARMLIAQEGLLCGGSAGSTVAVAVKAAQ 379

  Fly   332 KLKKGQRCVVILPDGIRNYMTKFVSDNWMEARNF--KEPVNEHGHWWWSLAIAELELPAPPVILK 394
            :|::||||||||||.:|||||||:||.||..:.|  :|.:.|...|||.|.:.||.|.||..:|.
Human   380 ELQEGQRCVVILPDSVRNYMTKFLSDRWMLQKGFLKEEDLTEKKPWWWHLRVQELGLSAPLTVLP 444

  Fly   395 SDATVGEAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSMNRQQSDPAIKALNKRVIRL 459
            : .|.|..|.::::...||.|||| :.|.:||:|....:::.:::...|.||...|.:.|:..::
Human   445 T-ITCGHTIEILREKGFDQAPVVD-EAGVILGMVTLGNMLSSLLAGKVQPSDQVGKVIYKQFKQI 507

  Fly   460 NESEILGKLARVLEVDPSVLILGK--------------NPA----GKVELK----ALATKLDVTT 502
            ..::.||:|:.:||:|...|::.:              .||    ||...:    .:.|.:|:..
Human   508 RLTDTLGRLSHILEMDHFALVVHEQIQSQDQAWAGVVGGPADHSTGKSSQRQMVFGVVTAIDLLN 572

  Fly   503 FIAAGKQKPK 512
            |:||.::..|
Human   573 FVAAQERDQK 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CbsNP_001285508.1 cysta_beta 45..505 CDD:273464 237/456 (52%)
CBS_like 54..352 CDD:107204 184/279 (66%)
CBS_pair_PALP_assoc 386..504 CDD:239981 35/139 (25%)
CBSXP_011528076.1 cysta_beta 112..575 CDD:273464 237/456 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165149512
Domainoid 1 1.000 388 1.000 Domainoid score I794
eggNOG 1 0.900 - - E1_COG0031
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H37258
Inparanoid 1 1.050 514 1.000 Inparanoid score I1313
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54083
OrthoDB 1 1.010 - - D1016546at2759
OrthoFinder 1 1.000 - - FOG0000642
OrthoInspector 1 1.000 - - otm42180
orthoMCL 1 0.900 - - OOG6_100154
Panther 1 1.100 - - LDO PTHR10314
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R286
SonicParanoid 1 1.000 - - X341
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
1514.840

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