DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cbs and MCY1

DIOPT Version :9

Sequence 1:NP_001285508.1 Gene:Cbs / 33081 FlyBaseID:FBgn0031148 Length:522 Species:Drosophila melanogaster
Sequence 2:NP_011526.1 Gene:MCY1 / 852895 SGDID:S000003244 Length:393 Species:Saccharomyces cerevisiae


Alignment Length:361 Identity:108/361 - (29%)
Similarity:169/361 - (46%) Gaps:66/361 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 EVIGCTPLVKLNNIPASDGIECEMYAKCEFLNPGGSVKDRIGYRMVQDAEEQGLL---KPGYTII 112
            |:||.|||||:.::..:.|:  .:|||.|..||.||.|||:...:::.|||.|.|   :||: :.
Yeast    51 ELIGNTPLVKIRSLTKATGV--NIYAKLELCNPAGSAKDRVALNIIKTAEELGELVRGEPGW-VF 112

  Fly   113 EPTSGNTGIGLAMACAVKGYKCIIVMPEKMSNEKVSALRTLGAKIIRTPTEAAYDSPEGLIYVAQ 177
            |.|||:|||.:|:.|...||:..|.:|:..|.||::.|.:|||.:.:....:..| |...:..|:
Yeast   113 EGTSGSTGISIAVVCNALGYRAHISLPDDTSLEKLALLESLGATVNKVKPASIVD-PNQYVNAAK 176

  Fly   178 QLQRETPNS------IVLDQYRNAGNPLAHYDGTAAEILWQLDNKVDMIVVSAGTAGTISGIGRK 236
            :...|...|      :..||:.|..|...||..|..||..|....:|..:...||.|||:|:.:.
Yeast   177 KACNELKKSGNGIRAVFADQFENEANWKVHYQTTGPEIAHQTKGNIDAFIAGCGTGGTITGVAKF 241

  Fly   237 IKE--QVPSCQIVGVDPYGSILARPAELNKTDVQFYE-------------------------VEG 274
            :||  ::| |.:|..||.||             .||.                         |||
Yeast   242 LKERAKIP-CHVVLADPQGS-------------GFYNRVNYGVMYDYVEKEGTRRRHQVDTIVEG 292

  Fly   275 IG-----YDFPPTVFDDTVVDVWTKIGDSDCFPMSRRLNAEEGLLCGGSSGGAMHAALEHARKLK 334
            ||     ::|.   ..:..:|...::.|:....|::.|:..:||..|.|:.....||::.|:.|.
Yeast   293 IGLNRITHNFH---MGEKFIDESIRVNDNQAIRMAKYLSVNDGLFVGSSTAINAVAAIQVAKTLP 354

  Fly   335 KGQRCVVILPDGIRNYMTKFVSDNWMEARNFKEPVN 370
            .|...|:|..|....:::||    |.||:.....|:
Yeast   355 HGSNIVIIACDSGSRHLSKF----WKEAKEIDHDVS 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CbsNP_001285508.1 cysta_beta 45..505 CDD:273464 108/361 (30%)
CBS_like 54..352 CDD:107204 100/338 (30%)
CBS_pair_PALP_assoc 386..504 CDD:239981
MCY1NP_011526.1 CBS_like 54..372 CDD:107204 100/338 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0031
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100154
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X341
TreeFam 00.000 Not matched by this tool.
43.710

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