DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cbs and CYSD2

DIOPT Version :9

Sequence 1:NP_001285508.1 Gene:Cbs / 33081 FlyBaseID:FBgn0031148 Length:522 Species:Drosophila melanogaster
Sequence 2:NP_001031956.1 Gene:CYSD2 / 832872 AraportID:AT5G28020 Length:323 Species:Arabidopsis thaliana


Alignment Length:326 Identity:124/326 - (38%)
Similarity:180/326 - (55%) Gaps:19/326 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 ITPNILEVIGCTPLVKLNNIPASDGIECEMYAKCEFLNPGGSVKDRIGYRMVQDAEEQGLLKPG- 108
            |..:|.|:||.||:|.|||:  .||....:.||.|.:.|..||||||.|.|::|||::||:.|| 
plant     7 IKNDITELIGNTPMVYLNNV--VDGCVARIAAKLEMMEPCSSVKDRIAYSMIKDAEDKGLITPGK 69

  Fly   109 YTIIEPTSGNTGIGLAMACAVKGYKCIIVMPEKMSNEKVSALRTLGAKIIRTPTEAAYDSPEGLI 173
            .|:||||:||||||||...|.:|||.|:|||..||.|:...||.|||::..:......   :|::
plant    70 STLIEPTAGNTGIGLACMGAARGYKVILVMPSTMSLERRIILRALGAELHLSDQRIGL---KGML 131

  Fly   174 YVAQQLQRETPNSIVLDQYRNAGNPLAHYDGTAAEILWQLDNKVDMIVVSAGTAGTISGIGRKIK 238
            ...:.:..:||...:..|:.|..||..||..|..||......|||::|...||.||.:|:|:.:|
plant   132 EKTEAILSKTPGGYIPQQFENPANPEIHYRTTGPEIWRDSAGKVDILVAGVGTGGTATGVGKFLK 196

  Fly   239 EQVPSCQIVGVDPYGS-ILA--RPAELNKTDVQFYEVEGIGYDFPPTVFDDTVVDVWTKIGDSDC 300
            ||....::..|:|..| :|:  :|..        :.::|||....|...|.|:||...::...:.
plant   197 EQNKDIKVCVVEPVESPVLSGGQPGP--------HLIQGIGSGIVPFNLDLTIVDEIIQVAGEEA 253

  Fly   301 FPMSRRLNAEEGLLCGGSSGGAMHAALEHARKLKK-GQRCVVILPDGIRNYM-TKFVSDNWMEAR 363
            ...::.|..:||||.|.|||.|..|||:.|::.:. |:..||:.|.|...|: ||.......||.
plant   254 IETAKLLALKEGLLVGISSGAAAAAALKVAKRPENAGKLIVVVFPSGGERYLSTKLFDSIRYEAE 318

  Fly   364 N 364
            |
plant   319 N 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CbsNP_001285508.1 cysta_beta 45..505 CDD:273464 124/326 (38%)
CBS_like 54..352 CDD:107204 115/303 (38%)
CBS_pair_PALP_assoc 386..504 CDD:239981
CYSD2NP_001031956.1 PLN00011 1..323 CDD:177651 124/326 (38%)
PLN02565 3..323 CDD:166206 124/326 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 206 1.000 Domainoid score I821
eggNOG 1 0.900 - - E1_COG0031
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 210 1.000 Inparanoid score I1254
OMA 1 1.010 - - QHG54083
OrthoDB 1 1.010 - - D1016546at2759
OrthoFinder 1 1.000 - - FOG0000642
OrthoInspector 1 1.000 - - otm2614
orthoMCL 1 0.900 - - OOG6_100154
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X341
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.780

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