DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cbs and cys12

DIOPT Version :10

Sequence 1:NP_608424.1 Gene:Cbs / 33081 FlyBaseID:FBgn0031148 Length:522 Species:Drosophila melanogaster
Sequence 2:NP_593343.1 Gene:cys12 / 2542583 PomBaseID:SPAC3A12.17C Length:395 Species:Schizosaccharomyces pombe


Alignment Length:349 Identity:111/349 - (31%)
Similarity:165/349 - (47%) Gaps:34/349 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 QQITPNILEVIGCTPLVKLNNIPASDGIECEMYAKCEFLNPGGSVKDRIGYRMVQDAEEQGLLKP 107
            :.|...:..:||.|.:|::.::..:.|  |::.||.||||||.|.|||:..:|::.|||.|.|.|
pombe    40 EDIVNGVEGLIGNTKMVRIKSLSQATG--CDILAKAEFLNPGNSPKDRVALQMIRTAEENGDLVP 102

  Fly   108 --GYTIIEPTSGNTGIGLAMACAVKGYKCIIVMPEKMSNEKVSALRTLGAKIIRTPTEAAYDSPE 170
              ...:.|.|:|:|||.:||.|...||...|.||...|.||...|..|||.:.|. |.|....|.
pombe   103 YQSNAVYEGTAGSTGISIAMLCCSLGYDSRIYMPSDQSKEKSDILELLGAHVQRV-TPAPIVDPN 166

  Fly   171 GLIYVAQQLQRETPNSIV----------LDQYRNAGNPLAHYDGTAAEILWQLDNKVDMIVVSAG 225
            ..:..|   :|...|..|          .:|:.|..|..||::.|..||..|...|:|..:..:|
pombe   167 HFVNTA---RRNAANHTVDESIPGKGYFANQFENPANWQAHFNSTGPEIWRQCAGKLDAFIAGSG 228

  Fly   226 TAGTISGIGRKIKEQVPSCQIVGVDPYGS-------------ILARPAELNKTDVQFYEVEGIGY 277
            |.|||:||.|.:|.:.||..:...||.||             :..|.....:..|... |||:|.
pombe   229 TGGTIAGISRYLKSKDPSITVCLADPPGSGLYHKVLHGVMFDLAEREGTRRRHQVDTI-VEGVGI 292

  Fly   278 DFPPTVFD--DTVVDVWTKIGDSDCFPMSRRLNAEEGLLCGGSSGGAMHAALEHARKLKKGQRCV 340
            :.....|.  :.::|:..::.|.....|||.|...:||..|.||.....||:..|:||..|.|.|
pombe   293 NRMTRNFSIAEPLIDMAYRVTDEQAVAMSRYLVTHDGLFVGSSSAVNCVAAVRLAKKLGPGHRIV 357

  Fly   341 VILPDGIRNYMTKFVSDNWMEARN 364
            .:|.|....:.:|..::.::..:|
pombe   358 TLLCDPGSRHFSKLYNEEFLRKKN 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CbsNP_608424.1 cysta_beta 45..505 CDD:273464 111/347 (32%)
cys12NP_593343.1 Trp-synth-beta_II 41..387 CDD:444852 111/348 (32%)

Return to query results.
Submit another query.