DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cbs and cys11

DIOPT Version :9

Sequence 1:NP_001285508.1 Gene:Cbs / 33081 FlyBaseID:FBgn0031148 Length:522 Species:Drosophila melanogaster
Sequence 2:NP_595332.1 Gene:cys11 / 2540946 PomBaseID:SPBC36.04 Length:351 Species:Schizosaccharomyces pombe


Alignment Length:333 Identity:127/333 - (38%)
Similarity:176/333 - (52%) Gaps:25/333 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 ITPNILEVIGCTPLVKLNNIPASDGIECEMYAKCEFLNPGGSVKDRIGYRMVQDAEEQGLLKPGY 109
            |....:..||.|||::||.:....|  |.:.||.||.|||||||||..|.:|:|||::|.|..|.
pombe    13 IVSGFIGAIGRTPLIRLNTLSNETG--CNILAKAEFQNPGGSVKDRAAYYVVRDAEKKGKLSRGG 75

  Fly   110 TIIEPTSGNTGIGLAMACAVKGYKCIIVMPEKMSNEKVSALRTLGAKIIRTPTEAAYDSPEGLIY 174
            ||:|.|:||||||||.....:||||:|.||...|..|:..|:.|||::...|. |.:.:|....:
pombe    76 TIVEGTAGNTGIGLAHIARARGYKCVIYMPNTQSQAKIDTLKFLGAEVHPVPV-APFSNPLNYNH 139

  Fly   175 VAQQLQRETPNSIVLDQYRNAGNPLAHYDGTAAEILWQLDNKVDMIVVSAGTAGTISGIGRKIKE 239
            .|::....|||:...||:.|..|.|:||:.|..||..|....||....|.||.||.:|:.:.:||
pombe   140 QARRHAESTPNASWTDQFDNVANLLSHYETTGPEIWDQTKGTVDGFTCSTGTGGTFAGVTKYLKE 204

  Fly   240 ----QVPSCQIVGVDPYGSIL-----ARPAELNKTDVQFYEVEGIGY-----DFPPTVFDDTVVD 290
                :|.|   ...||.||:|     .:....:.....|  .||||.     :..| |:|  ::|
pombe   205 KSDGRVAS---FVADPPGSVLYSHIKTKGKHPDNKGSSF--TEGIGQGRITGNVQP-VYD--LID 261

  Fly   291 VWTKIGDSDCFPMSRRLNAEEGLLCGGSSGGAMHAALEHARKLKKGQRCVVILPDGIRNYMTKFV 355
            ...||.|.....|..||..:|||..||||...:.||:|.|:.|..|:..|.||.|....|.|:..
pombe   262 DAMKIPDEKSINMFFRLLDQEGLFLGGSSCLNVVAAVEMAKILGPGKTVVTILCDSGHKYATRLF 326

  Fly   356 SDNWMEAR 363
            |.:::|::
pombe   327 SRSFLESK 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CbsNP_001285508.1 cysta_beta 45..505 CDD:273464 127/333 (38%)
CBS_like 54..352 CDD:107204 122/311 (39%)
CBS_pair_PALP_assoc 386..504 CDD:239981
cys11NP_595332.1 PRK10717 13..336 CDD:182672 127/333 (38%)
PALP 20..316 CDD:278708 121/306 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 175 1.000 Domainoid score I856
eggNOG 1 0.900 - - E1_COG0031
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 185 1.000 Inparanoid score I1083
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000642
OrthoInspector 1 1.000 - - otm47406
orthoMCL 1 0.900 - - OOG6_100154
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R286
SonicParanoid 1 1.000 - - X341
TreeFam 00.000 Not matched by this tool.
98.790

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