DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cbs and T25D3.3

DIOPT Version :10

Sequence 1:NP_608424.1 Gene:Cbs / 33081 FlyBaseID:FBgn0031148 Length:522 Species:Drosophila melanogaster
Sequence 2:NP_493671.2 Gene:T25D3.3 / 188894 WormBaseID:WBGene00020797 Length:427 Species:Caenorhabditis elegans


Alignment Length:373 Identity:90/373 - (24%)
Similarity:147/373 - (39%) Gaps:87/373 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 VIGCTPLVKLN--NIPASDGIECEMYAKCEFLNPGGSVKDRIGYRMVQDAEEQGLLKPGYTIIEP 114
            ::|.||:..::  .:|:     ..:..|.|..:..||:|.|..:.::..|..:|.:|.|..:.|.
 Worm    61 LMGSTPIHVIDPPGLPS-----VRLVFKNESASLTGSLKHRYSWSLMMWALLEGHVKNGTHVFEA 120

  Fly   115 TSGNTGIGLAMACAVKGYKCIIVMPEKMSNEKVSALRTLGAKIIRTPTEAAYDSPEGLIYVAQQL 179
            :||||...|...|.:.|.:...|:|:.:...||..:......::|.|..      :.|| :|:||
 Worm   121 SSGNTACSLGYMCRLLGLQFTAVVPDTIEQVKVRRIEEQEGFVVRVPIS------DRLI-IAEQL 178

  Fly   180 QRETPNSIVLDQYRNAGNPLA-HYDGTAA---------EILWQLDNKVDMIVV-SAGTAGTISGI 233
            .:.| ....::|::||.:... |..|:|:         |:..||::....|.| .|||.||:|.|
 Worm   179 AKST-GGFFMNQFKNAFHAEEFHESGSASSKPSANLMHELFHQLNSTPPSIFVHPAGTGGTLSSI 242

  Fly   234 GRKIKEQVPSCQIVGVDPYGSILARPAELNKTDVQFYE--------------------VEGIGYD 278
            ||..|:.....:||..|...||             :|:                    :.||||.
 Worm   243 GRYAKKYGLDTEIVLADTQYSI-------------YYDYVLNGTFSKNTGAHHWVAPGMAGIGYG 294

  Fly   279 -------FPPTVFDDTVVDVWTKIGD---SDCFPMSRRLNAEEGLLCGGSSGGAMHAALEHARKL 333
                   ...|..|..|:|...||.|   :....::|.:.     :.||:|.|....|..|...|
 Worm   295 AMGPAQIAETTSLDPAVIDRVLKIPDLASTAAMKVARDVG-----INGGTSTGVNFLAALHIGAL 354

  Fly   334 KKGQR--------CVVILPDGIRNYMTKFVSDNWMEARNFKEPVNEHG 373
            .:.|.        ...||.|..:.|.|.:.:..|:     .|....||
 Worm   355 IRAQNPKNQEIFTIATILADSGKYYETTYFNRKWI-----SEKFKTHG 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CbsNP_608424.1 cysta_beta 45..505 CDD:273464 90/373 (24%)
T25D3.3NP_493671.2 CysK 61..379 CDD:439802 84/348 (24%)

Return to query results.
Submit another query.