DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cbs and cbs-2

DIOPT Version :10

Sequence 1:NP_608424.1 Gene:Cbs / 33081 FlyBaseID:FBgn0031148 Length:522 Species:Drosophila melanogaster
Sequence 2:NP_494215.2 Gene:cbs-2 / 186197 WormBaseID:WBGene00018783 Length:662 Species:Caenorhabditis elegans


Alignment Length:376 Identity:195/376 - (51%)
Similarity:248/376 - (65%) Gaps:28/376 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KPYERPADFIDPG----KPSKC--KWHLGTAEKSPHIHRGIAHRQQITPNILEVIGCTPLVKLNN 63
            ||. :|.:..||.    .|:|.  :|      ||....|  ..|..:..::|:.||.||||||.:
 Worm   299 KPI-KPREIFDPKVLDYDPTKMVGEW------KSSSKFR--PERPLVLDSVLDAIGKTPLVKLQH 354

  Fly    64 IPASDGIECEMYAKCEFLNPGGSVKDRIGYRMVQDAEEQGLLKPG------YTIIEPTSGNTGIG 122
            :|.:.|:.|.:|.||||||.|||.||||..:||:.||:.|  |||      .|:|||||||||||
 Worm   355 VPKAHGVRCNVYVKCEFLNAGGSTKDRIAKKMVEIAEKTG--KPGALTPGATTLIEPTSGNTGIG 417

  Fly   123 LAMACAVKGYKCIIVMPEKMSNEKVSALRTLGAKIIRTPTEAAYDSPEGLIYVAQQLQRETPNSI 187
            |::..||:||||:|.||||||.||.:.|..||:.|:|||.|||::||...|.||.:|:.|.|.::
 Worm   418 LSLVAAVRGYKCLITMPEKMSKEKSTTLSVLGSTIVRTPNEAAFNSPSSHIGVALRLKHEIPGAV 482

  Fly   188 VLDQYRNAGNPLAHYDGTAAEILWQL-DNKVDMIVVSAGTAGTISGIGRKIKEQVPSCQIVGVDP 251
            :||||.|.|||||||:.||.||||.: |.|:|::|:.|||.|||:||.|||.|:.|:..:|||||
 Worm   483 ILDQYCNPGNPLAHYEETAEEILWDMGDRKIDLVVLGAGTGGTITGISRKIHERRPNAIVVGVDP 547

  Fly   252 YGSILARPAELNKTDVQFYEVEGIGYDFPPTVFDDTVVDVWTKIGDSDCFPMSRRLNAEEGLLCG 316
            .||||..|......|  |||||||||||.|...|:..||.|.|..|.:.|.|:|.:...||:|||
 Worm   548 NGSILTGPTTGPAPD--FYEVEGIGYDFIPGTLDEKSVDSWLKSDDKESFLMAREIIRTEGILCG 610

  Fly   317 GSSGGAMHAALEHARK--LKKGQRCVVILPDGIRNYMTKFVSDNWMEARNF 365
            ||||.|:|.|||..||  |.:....||:||||||||:|||:.|:||:||.|
 Worm   611 GSSGCAVHYALEQCRKLDLPEDANVVVLLPDGIRNYLTKFLDDDWMKARGF 661

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CbsNP_608424.1 cysta_beta 45..505 CDD:273464 183/330 (55%)
cbs-2NP_494215.2 CysK 7..289 CDD:439802
cysta_beta 336..>662 CDD:273464 183/330 (55%)
Blue background indicates that the domain is not in the aligned region.

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