DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HSPA4 and Hsc70-3

DIOPT Version :9

Sequence 1:NP_002145.3 Gene:HSPA4 / 3308 HGNCID:5237 Length:840 Species:Homo sapiens
Sequence 2:NP_001285139.1 Gene:Hsc70-3 / 32133 FlyBaseID:FBgn0001218 Length:656 Species:Drosophila melanogaster


Alignment Length:706 Identity:204/706 - (28%)
Similarity:341/706 - (48%) Gaps:127/706 - (17%)


- Green bases have known domain annotations that are detailed below.


Human     2 SVVGIDLGFQSCYVAVARAGGIETIANEYSDRCTPACISF-GPKNRSIGAAAKSQVISNAKNTVQ 65
            :|:|||||.....|.|.:.|.:|.|||:..:|.||:.::| ....|.||.|||:|:.:|.:|||.
  Fly    30 TVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTADGERLIGDAAKNQLTTNPENTVF 94

Human    66 GFKRFHGRAFSD----------PFVEAEKS---NLAYDIVQLPTGLTGIKVTYMEEERNFTTEQV 117
            ..||..||.:||          ||...||:   :::.|..|      |.||        |..|::
  Fly    95 DAKRLIGREWSDTNVQHDIKFFPFKVVEKNSKPHISVDTSQ------GAKV--------FAPEEI 145

Human   118 TAMLLSKLKETAESVLKKPVVDCVVSVPCFYTDAERRSVMDATQIAGLNCLRLMNETTAVALAYG 182
            :||:|.|:|||||:.|.|.|...||:||.::.||:|::..||..||||..:|::||.||.|:|||
  Fly   146 SAMVLGKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGVIAGLQVMRIINEPTAAAIAYG 210

Human   183 IYKQDLPALEEKPRNVVFVDMGHSAYQVSVCAFNRGKLKVLATAFDTTLGGRKFDEVLVNHFCEE 247
            :.|      :|..:||:..|:|...:.||:...:.|..:|:||..||.|||..||:.:::||.:.
  Fly   211 LDK------KEGEKNVLVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMDHFIKL 269

Human   248 FGKKYKLDIKSKIRALLRLSQECEKLKKLMSANASDLPLSIECFMNDVDVSGTMNRGKFLEMCND 312
            :.||...||:...||:.:|.:|.||.|:.:| .:..:.:.||.|....|.|.|:.|.||.|:..|
  Fly   270 YKKKKGKDIRKDNRAVQKLRREVEKAKRALS-GSHQVRIEIESFFEGDDFSETLTRAKFEELNLD 333

Human   313 LLARVEPPLRSVLEQTKLKKEDIYAVEIVGGATRIPAVKEKISKFF-GKELSTTLNADEAVTRGC 376
            |......|::.|||...:.|:|::.:.:|||:||||.|::.:..|| |||.|..:|.||||..|.
  Fly   334 LFRSTLKPVQKVLEDADMNKKDVHEIVLVGGSTRIPKVQQLVKDFFGGKEPSRGINPDEAVAYGA 398

Human   377 ALQCAILSPAFKVREFSITDVVPYPISLRWNSPAEEGSSDCEVFSKNHAAPFSKVLTFY----RK 437
            |:|..:||.........:.||.|..:.:.     ..|....::..:|...|..|...|.    .:
  Fly   399 AVQAGVLSGEQDTDAIVLLDVNPLTMGIE-----TVGGVMTKLIPRNTVIPTKKSQVFSTASDNQ 458

Human   438 EPFTLEAYYSSPQDLPYPDPAIAQFSVQKVTPQSDGSSSKVKVKVRVNVHGIFSVSSASLVEVHK 502
            ...|::. |...:.:...:..:.:|.:..:.|...| ..:::|...::.:||..||:        
  Fly   459 HTVTIQV-YEGERPMTKDNHLLGKFDLTGIPPAPRG-IPQIEVSFEIDANGILQVSA-------- 513

Human   503 SEENEEPMETDQNAKEEEKMQVDQEEPHVEEQQQQTPAENKAESEEMETSQAGSKDKKMDQPPQA 567
                     .|:....:||:.:      ..:|.:.||.:                          
  Fly   514 ---------EDKGTGNKEKIVI------TNDQNRLTPED-------------------------- 537

Human   568 KKAKVKTSTVDLPIENQLLWQIDREMLNLYIENEGKMIMQDKLEKERNDAKNAVEEYVYEMRDKL 632
                                 |||     .|.:..|...:||..|||.:::|.:|.|.|.:::::
  Fly   538 ---------------------IDR-----MIRDAEKFADEDKKLKERVESRNELESYAYSLKNQI 576

Human   633 SGEYEKF---VSEDDRNSFTLKLEDTENWLYEDGEDQPKQVYVDKLAELKNLGQPI 685
             |:.:|.   :|:|::|.....::::..||.::.:..|:: |..:..:|:.:.||:
  Fly   577 -GDKDKLGAKLSDDEKNKLESAIDESIKWLEQNPDADPEE-YKKQKKDLEAIVQPV 630

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HSPA4NP_002145.3 HSPA4_NBD 2..384 CDD:212687 152/396 (38%)
HSP70 3..607 CDD:278441 183/622 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 500..575 6/74 (8%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 779..840
Hsc70-3NP_001285139.1 HSPA5-like_NBD 29..403 CDD:212681 152/393 (39%)
PTZ00009 32..643 CDD:240227 203/704 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.