DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15449 and Ssk

DIOPT Version :9

Sequence 1:NP_608423.1 Gene:CG15449 / 33079 FlyBaseID:FBgn0031146 Length:131 Species:Drosophila melanogaster
Sequence 2:NP_649184.1 Gene:Ssk / 40207 FlyBaseID:FBgn0036945 Length:162 Species:Drosophila melanogaster


Alignment Length:147 Identity:30/147 - (20%)
Similarity:52/147 - (35%) Gaps:45/147 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 VKFLELGFAVACLVLHFYSFNDRDIMTSFLATGTFTGY--------------IIVVIGVFAGVLM 63
            :|.|:|  .:..:::..|.:.|         .|.|.|.              .||..||..|.|:
  Fly    12 IKALKL--IINLVIIFLYRWGD---------GGEFLGIGGTWNLNEEKSADAEIVASGVMVGFLI 65

  Fly    64 RAPIH-------------KRIDIFFSVLGCTLFVASGVFIIEAWE-------FSFRTRTRDLALI 108
            ....|             :..|...:|:||.:::|.|...:..|:       |.:....|.:.:.
  Fly    66 YTGCHTIAFAFGTTKHKGELCDTIMNVVGCIMWIAVGGVALHYWKGYMSDEGFLYVNSERQVGIA 130

  Fly   109 KASLSIVNGVLFGFDAV 125
            ..||.::.|.|:..|.|
  Fly   131 MGSLCVIEGALYLLDTV 147



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR36692
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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