DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ntf-2 and Nxt1

DIOPT Version :10

Sequence 1:NP_608422.1 Gene:Ntf-2 / 33078 FlyBaseID:FBgn0031145 Length:130 Species:Drosophila melanogaster
Sequence 2:NP_001099991.1 Gene:Nxt1 / 296219 RGDID:1309327 Length:140 Species:Rattus norvegicus


Alignment Length:124 Identity:34/124 - (27%)
Similarity:53/124 - (42%) Gaps:23/124 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 FVQQYYAIFDDPANRANVVN-FYSATDSFMTFEGHQIQGAPKI---LEKVQSLSFQKITRVITTV 74
            ||..||...|   ||..::: .|..| :.:.:.|:.:.|...:   .|.:.|..||     |..|
  Rat    20 FVNVYYTTMD---NRRRLLSRLYMGT-ATLVWNGNAVSGQESLSEFFEMLPSSEFQ-----INVV 75

  Fly    75 DSQPTFDGG------VLINVLGRLQCDDDPPHAFSQVFFLKANAG----TFFVAHDIFR 123
            |.||..|..      ||:.:.|.::.:.:....|:|.|.|.|.|.    .:.:|.|.||
  Rat    76 DCQPVHDEATPSQTTVLVVICGTVKFEGNKQRDFNQNFILTAQASPSNTVWKIASDCFR 134

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ntf-2NP_608422.1 NTF2 6..125 CDD:238403 34/124 (27%)
Nxt1NP_001099991.1 NTF2 12..137 CDD:238403 34/124 (27%)

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