DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1529 and Sry-beta

DIOPT Version :10

Sequence 1:NP_001138223.2 Gene:CG1529 / 33077 FlyBaseID:FBgn0031144 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_524579.1 Gene:Sry-beta / 43570 FlyBaseID:FBgn0003511 Length:356 Species:Drosophila melanogaster


Alignment Length:357 Identity:84/357 - (23%)
Similarity:139/357 - (38%) Gaps:63/357 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 THCPDPRLIAILQKLLDIDILKQPHGFPTEICNLCHNAVVYFD----ELRQVARESSQKLIGWQP 84
            |..|...::...:|:::..:...|:   :..|..|...:..:|    .|.||.|:.:..|:|.:.
  Fly    31 TFKPIKDILKYFEKIINQRLELLPN---SAACRDCLEYLFNYDRLVRNLSQVQRQIADALLGCRQ 92

  Fly    85 VDIAVDRVKEEPPDEGLKENHEENEHELEEEHEKQADGQ-------QVDLSKKQEDQKKILDDRE 142
            |                     |.:.|.:::..|:|..|       |....|:.|.|....|:.|
  Fly    93 V---------------------EGKAETKQQAAKRARVQVPAFKIVQATALKEPERQPGEEDECE 136

  Fly   143 --------DEEY----PDE-YENSQQQLSQGTGSKRRAGLACDQCGKQVYKLPYLEAHIRSVHQG 194
                    |||:    ||: ..:|:::....|     ..:.|..||:.......||.||::....
  Fly   137 EFMKEEMLDEEFQFSEPDDSMPSSEEEFFTET-----TEIPCHICGEMFSSQEVLERHIKADTCQ 196

  Fly   195 YSKPFLCRSCDKSFTRYEQLRSHMRNAHPQLEQLQQELRDLICELCNRQYSTKNALGEHLKRHAQ 259
            .|:...|..|.......|.|..|| |.|....:|:       |..|::::|.|..:..|::.|..
  Fly   197 KSEQATCNVCGLKVKDDEVLDLHM-NLHEGKTELE-------CRYCDKKFSHKRNVLRHMEVHWD 253

  Fly   260 RKEHVCEHCGVAKVTRTELLTHLRTHNPTWERFKCEQCPQLFRHKSAISRHVRVVHEGQRRFQCG 324
            :|::.|:.||........:..||..|:.......||.|.|.|:.|.....|:|.....:.|:.|.
  Fly   254 KKKYQCDKCGERFSLSWLMYNHLMRHDAEENALICEVCHQQFKTKRTYKHHLRTHQTDRPRYPCP 318

  Fly   325 HCEKKFGTHASQVRHERLH--TESTGSGEAAE 354
            .|||.|....:...|:|:|  .|...|.||.|
  Fly   319 DCEKSFVDKYTLKVHKRVHQPVEKPESAEAKE 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1529NP_001138223.2 zf-AD 11..79 CDD:462262 11/58 (19%)
C2H2 Zn finger 171..192 CDD:275368 7/20 (35%)
C2H2 Zn finger 201..222 CDD:275368 7/20 (35%)
C2H2 Zn finger 237..257 CDD:275368 5/19 (26%)
C2H2 Zn finger 265..285 CDD:275368 5/19 (26%)
C2H2 Zn finger 294..315 CDD:275368 8/20 (40%)
C2H2 Zn finger 323..343 CDD:275368 7/19 (37%)
C2H2 Zn finger 360..380 CDD:275368
tolA 391..>495 CDD:236545
Sry-betaNP_524579.1 C2H2 Zn finger 203..223 CDD:275368 7/20 (35%)
C2H2 Zn finger 231..251 CDD:275368 5/19 (26%)
C2H2 Zn finger 259..308 CDD:275368 14/48 (29%)
C2H2 Zn finger 288..303 CDD:275370 6/14 (43%)
zf-C2H2 315..337 CDD:395048 7/21 (33%)
C2H2 Zn finger 317..337 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.

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