DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1529 and wor

DIOPT Version :9

Sequence 1:NP_001138223.2 Gene:CG1529 / 33077 FlyBaseID:FBgn0031144 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_476601.1 Gene:wor / 34906 FlyBaseID:FBgn0001983 Length:548 Species:Drosophila melanogaster


Alignment Length:368 Identity:89/368 - (24%)
Similarity:146/368 - (39%) Gaps:88/368 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 LRQVARESSQKLIGWQ---------PVDIAVDRVKEEPPDEGLKENHEENEHELEEEHEKQADGQ 123
            |:.|||    .|:..|         |:|:..|           :||.:.|:.:::..::.....|
  Fly   222 LQNVAR----ALLSMQHMAPQHAPPPIDMEED-----------QENQDINQLKIKSSNDLYYQCQ 271

  Fly   124 QVD--------LSKKQEDQKKILDDREDEEYPDEYENSQQQL--SQGTGSKRRAGLACDQ---CG 175
            |.:        |.|.|:..              .||:::.::  ||..||    |...||   |.
  Fly   272 QCNKCYATYAGLVKHQQTH--------------AYESTEYKIIRSQPGGS----GAIVDQTEFCT 318

  Fly   176 KQVYKLPYLEAHIRSVHQGYSKP-----FLCRSCDKSFTRYEQLRSHMRNAHPQLEQLQQELRDL 235
            .|...| ...|::.|. |...||     :.|:.|.||::.|..|..|.:...|..|. .|..:..
  Fly   319 DQASAL-IQAANVASA-QSMQKPVGVPRYHCQDCGKSYSTYSGLSKHQQFHCPSAEG-NQVKKVF 380

  Fly   236 ICELCNRQYSTKNALGEHLKRHAQRKEHVCEHCGVAKVTRTELLT-HLRTHNPTWER-FKCEQCP 298
            .|:.|::.|.:..||..|::.|....:  |..||.| .:|..||. |:|||  |.|: |.|:.|.
  Fly   381 SCKNCDKTYVSLGALKMHIRTHTLPCK--CPICGKA-FSRPWLLQGHIRTH--TGEKPFSCQHCN 440

  Fly   299 QLFRHKSAISRHVRVVHEGQRRFQCGHCEKKFGTHASQVRH--ERLHTESTGSGEAAEEWPFACI 361
            :.|..:|.:..|:: .|...:::.|..|.|.|...:...:|  ....||.:| |.:.....|   
  Fly   441 RAFADRSNLRAHMQ-THSDVKKYSCPTCTKSFSRMSLLAKHLQSGCQTEQSG-GPSGSGGGF--- 500

  Fly   362 HCQKPCVSRQTLELHLR----RHRARKTHRKRREHSRESQEQE 400
                   .:|.|:.||:    .|...:.:......|...:|:|
  Fly   501 -------DQQQLQQHLQVYEEGHNPHQLYYAGSVGSSNGEEEE 536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1529NP_001138223.2 zf-AD 11..79 CDD:285071 4/10 (40%)
C2H2 Zn finger 171..192 CDD:275368 7/23 (30%)
zf-C2H2_2 201..>257 CDD:289522 16/55 (29%)
C2H2 Zn finger 201..222 CDD:275368 7/20 (35%)
C2H2 Zn finger 237..257 CDD:275368 6/19 (32%)
C2H2 Zn finger 265..285 CDD:275368 9/20 (45%)
zf-C2H2_8 268..349 CDD:292531 26/84 (31%)
C2H2 Zn finger 294..315 CDD:275368 5/20 (25%)
C2H2 Zn finger 323..343 CDD:275368 5/21 (24%)
C2H2 Zn finger 360..380 CDD:275368 4/23 (17%)
worNP_476601.1 C2H2 Zn finger 270..290 CDD:275368 5/19 (26%)
C2H2 Zn finger 317..334 CDD:275368 5/18 (28%)
zf-C2H2 345..367 CDD:278523 7/21 (33%)
C2H2 Zn finger 347..367 CDD:275368 7/19 (37%)
PHA00732 379..>417 CDD:177300 11/40 (28%)
C2H2 Zn finger 382..402 CDD:275368 6/19 (32%)
zf-C2H2_8 405..482 CDD:292531 25/82 (30%)
zf-C2H2 406..428 CDD:278523 9/24 (38%)
C2H2 Zn finger 408..428 CDD:275368 9/20 (45%)
zf-H2C2_2 421..444 CDD:290200 10/24 (42%)
zf-C2H2 434..456 CDD:278523 6/22 (27%)
C2H2 Zn finger 436..456 CDD:275368 5/20 (25%)
zf-H2C2_2 448..473 CDD:290200 6/25 (24%)
C2H2 Zn finger 464..481 CDD:275368 4/16 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45457172
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24409
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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