DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1529 and klu-1

DIOPT Version :9

Sequence 1:NP_001138223.2 Gene:CG1529 / 33077 FlyBaseID:FBgn0031144 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_493611.2 Gene:klu-1 / 173366 WormBaseID:WBGene00013970 Length:543 Species:Caenorhabditis elegans


Alignment Length:125 Identity:38/125 - (30%)
Similarity:52/125 - (41%) Gaps:15/125 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   171 CDQCGKQVYKLPYLEAHIRSVHQ-------GYSKPFLCRSCDKSFTRYEQLRSHMRNAHPQLEQL 228
            |..||:.......|..||.|.|:       ..||...|..|.|||:|.:.|..|||        |
 Worm   334 CTLCGQAFAVHDRLAKHIASRHRQRSCTLDDASKVHKCNMCSKSFSRSDMLTRHMR--------L 390

  Fly   229 QQELRDLICELCNRQYSTKNALGEHLKRHAQRKEHVCEHCGVAKVTRTELLTHLRTHNPT 288
            ....:...|..||:.:|..:.|..||:.|...|.:.|..|..:...|..:..|:|||:.|
 Worm   391 HTGAKPYSCPTCNQVFSRSDHLSTHLRTHTGEKPYACPMCNYSASRRDMISRHMRTHSLT 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1529NP_001138223.2 zf-AD 11..79 CDD:285071
C2H2 Zn finger 171..192 CDD:275368 7/20 (35%)
zf-C2H2_2 201..>257 CDD:289522 18/55 (33%)
C2H2 Zn finger 201..222 CDD:275368 10/20 (50%)
C2H2 Zn finger 237..257 CDD:275368 7/19 (37%)
C2H2 Zn finger 265..285 CDD:275368 5/19 (26%)
zf-C2H2_8 268..349 CDD:292531 7/21 (33%)
C2H2 Zn finger 294..315 CDD:275368
C2H2 Zn finger 323..343 CDD:275368
C2H2 Zn finger 360..380 CDD:275368
klu-1NP_493611.2 C2H2 Zn finger 334..354 CDD:275368 6/19 (32%)
zf-C2H2 369..391 CDD:278523 10/29 (34%)
C2H2 Zn finger 371..391 CDD:275368 10/27 (37%)
zf-H2C2_2 383..408 CDD:290200 8/32 (25%)
COG5048 395..>448 CDD:227381 15/52 (29%)
C2H2 Zn finger 399..419 CDD:275368 7/19 (37%)
zf-H2C2_2 411..436 CDD:290200 7/24 (29%)
C2H2 Zn finger 427..447 CDD:275368 5/19 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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