DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1529 and ZNF560

DIOPT Version :9

Sequence 1:NP_001138223.2 Gene:CG1529 / 33077 FlyBaseID:FBgn0031144 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_689689.2 Gene:ZNF560 / 147741 HGNCID:26484 Length:790 Species:Homo sapiens


Alignment Length:348 Identity:98/348 - (28%)
Similarity:148/348 - (42%) Gaps:55/348 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 EDEEYPDEYENSQ---QQLSQGTGSKRRAGLACDQCGKQVYKLPYLEAHIRSVHQGYSKPFLCRS 203
            |.:||...:..|.   :.....||.||   ..||||||.......|.||:|: |.| .|||.|..
Human   461 EHKEYGKAFGTSSGVIEDRRSNTGQKR---FDCDQCGKVFVSFSSLFAHLRT-HTG-EKPFKCYK 520

  Fly   204 CDKSFTRYEQLRSHMRNAHPQLEQLQQELRDLICELCNRQYSTKNALGEHLKRHAQRKEHVCEHC 268
            |.|.||....||.||| .|.: |:|.|      |:.|.:.::..:.|.:||:.||..|.:.|..|
Human   521 CGKPFTSSACLRIHMR-THTE-ERLYQ------CKKCGKAFTKCSYLTKHLRTHAGEKPYECMKC 577

  Fly   269 GVAKVTRTELLTHLRTHNPTWERFKCEQCPQLFRHKSAISRHVRVVHEGQRRFQCGHCEKKFGTH 333
            |.|...|:.|..|||.|:.. :.::|::|.:.|..:|.:::|:| .|.|.:.::...|.|.|...
Human   578 GKAFTERSYLTKHLRRHSGE-KPYECKKCGKAFTERSDLTKHLR-RHTGDKPYEYKDCGKAFVVS 640

  Fly   334 ASQVRHERLHTESTGSGEAAEEWPFACIHCQKPCVSRQTLELHLRRHRARKTHRKRREHSRESQE 398
            :|.|.|.|.||...         |:.|..|:|.......|..||:.|.|.|| .:........:.
Human   641 SSLVDHLRTHTGYK---------PYKCNACEKAYSRSCVLTQHLKTHAAEKT-SECNACGNSFRN 695

  Fly   399 QEQEHDRDQEQGAREAQQDQLRKGEKLRQRDLSR-----ESHRNEVTMQTSQRPNECQQGQESYD 458
            ....|||          ...|.|.:..:.:|..:     ....|.|.:.|.::|.:|::..:::.
Human   696 SMCFHDR----------LKTLTKIKPYKCKDCGKAFTCHSDLTNHVRIHTGEKPYKCKECGKAFR 750

  Fly   459 PE------------PDPLEASQC 469
            ..            ..|.|..||
Human   751 TSSGRIQHLRTHMGEKPFECDQC 773

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1529NP_001138223.2 zf-AD 11..79 CDD:285071
C2H2 Zn finger 171..192 CDD:275368 10/20 (50%)
zf-C2H2_2 201..>257 CDD:289522 19/55 (35%)
C2H2 Zn finger 201..222 CDD:275368 10/20 (50%)
C2H2 Zn finger 237..257 CDD:275368 5/19 (26%)
C2H2 Zn finger 265..285 CDD:275368 9/19 (47%)
zf-C2H2_8 268..349 CDD:292531 26/80 (33%)
C2H2 Zn finger 294..315 CDD:275368 6/20 (30%)
C2H2 Zn finger 323..343 CDD:275368 7/19 (37%)
C2H2 Zn finger 360..380 CDD:275368 6/19 (32%)
ZNF560NP_689689.2 KRAB 13..69 CDD:214630
KRAB 13..50 CDD:279668
KRAB 110..161 CDD:214630
KRAB 110..149 CDD:279668
C2H2 Zn finger 294..314 CDD:275368
C2H2 Zn finger 323..342 CDD:275368
COG5048 344..754 CDD:227381 94/327 (29%)
C2H2 Zn finger 350..370 CDD:275368
zf-H2C2_2 362..386 CDD:290200
C2H2 Zn finger 378..398 CDD:275368
C2H2 Zn finger 406..426 CDD:275368
C2H2 Zn finger 434..454 CDD:275368
C2H2 Zn finger 490..510 CDD:275368 10/20 (50%)
zf-H2C2_2 502..527 CDD:290200 13/26 (50%)
C2H2 Zn finger 518..538 CDD:275368 10/20 (50%)
zf-H2C2_2 531..554 CDD:290200 11/30 (37%)
C2H2 Zn finger 546..566 CDD:275368 5/19 (26%)
zf-H2C2_2 558..582 CDD:290200 10/23 (43%)
C2H2 Zn finger 574..594 CDD:275368 9/19 (47%)
zf-H2C2_2 586..610 CDD:290200 7/24 (29%)
zf-C2H2 600..622 CDD:278523 6/22 (27%)
C2H2 Zn finger 602..622 CDD:275368 6/20 (30%)
C2H2 Zn finger 630..650 CDD:275368 7/19 (37%)
C2H2 Zn finger 658..678 CDD:275368 6/19 (32%)
C2H2 Zn finger 714..734 CDD:275368 3/19 (16%)
zf-H2C2_2 726..751 CDD:290200 5/24 (21%)
C2H2 Zn finger 742..762 CDD:275368 1/19 (5%)
zf-H2C2_2 757..779 CDD:290200 4/17 (24%)
C2H2 Zn finger 770..790 CDD:275368 2/4 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.