DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1304 and LOC560023

DIOPT Version :9

Sequence 1:NP_608418.1 Gene:CG1304 / 33074 FlyBaseID:FBgn0031141 Length:260 Species:Drosophila melanogaster
Sequence 2:XP_021325702.1 Gene:LOC560023 / 560023 -ID:- Length:271 Species:Danio rerio


Alignment Length:275 Identity:76/275 - (27%)
Similarity:123/275 - (44%) Gaps:43/275 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 AILLGSF------------------LLLLAVPVHSAPGSLNGRVVGGEDAVKNQFPHQVSLRNAG 53
            |:|:|.|                  .|:|||.|..|   .:.|::||::.|.....:||||:...
Zfish     4 AVLIGPFRATILSRSAAGMAQLLWVFLVLAVMVRDA---FSQRIIGGQEVVPYSIKYQVSLQVDR 65

  Fly    54 SHSCGGSILSRNYVLTAAHCVTNQDSNGNSVPIAAERFTIRAGSNDRFSGGVLVQVAEVIVHEEY 118
            .|.|||:::...:|||||||.  :.::...|.::.....:..|...      :..||:|..|..|
Zfish    66 KHFCGGTLIQPQWVLTAAHCW--RPASVIQVVLSEHNLAVEEGFEQ------VCTVAKVFSHVAY 122

  Fly   119 G--NFLNDVALLRLESPLILSASIQPIDLPTADTP---ADVDVIISGWGRIKHQGDLPRYLQYNT 178
            .  .|.||:.:::|.:|..::|.:||..|||||||   ......:||||..:    |..:.....
Zfish   123 NPKTFNNDIMIIKLTAPAQINAYVQPALLPTADTPELAGGSSCTVSGWGVTR----LYNFYLSPI 183

  Fly   179 LKSISLE---RCDELIGWGVQSELCLIHEADNG--ACNGDSGGPAVYNNQVVGVAGFVWSACGTS 238
            |:::.:|   .|.....:.|...:........|  :|.||||||.:.:..:.|:..:........
Zfish   184 LRAVDVEIFSSCQLYYYYRVNDNMICAGSRFGGKDSCQGDSGGPLICDGYLEGIVSWGIGCALPY 248

  Fly   239 YPDGYARVYYHNEWI 253
            ||..|.:|..:|.||
Zfish   249 YPGVYTKVRNYNRWI 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1304NP_608418.1 Tryp_SPc 31..253 CDD:214473 64/231 (28%)
Tryp_SPc 32..256 CDD:238113 65/232 (28%)
LOC560023XP_021325702.1 Tryp_SPc 43..263 CDD:214473 64/231 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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