DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1304 and CG5246

DIOPT Version :10

Sequence 1:NP_608418.1 Gene:CG1304 / 33074 FlyBaseID:FBgn0031141 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster


Alignment Length:276 Identity:86/276 - (31%)
Similarity:131/276 - (47%) Gaps:39/276 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VKAAILLGSFLLLL------AVPVHSAPGSLN---------GRVVGGEDAVKNQFPHQVSLRNA- 52
            :|..:|: |.|::|      :|.:|.. ..||         .||:||.|:.....|:|||:.|. 
  Fly     1 MKCLVLI-SVLVILSQCSAKSVKIHRR-HQLNHHLGHVKPETRVIGGVDSPTGFAPYQVSIMNTF 63

  Fly    53 GSHSCGGSILSRNYVLTAAHCVTNQDSNGNSVPIAAERFTIRAGSNDRFSGGV--LVQVAEVIVH 115
            |.|.|||||::..::||||||:        ..||  :...|..|:.|....|.  ||..:::...
  Fly    64 GEHVCGGSIIAPQWILTAAHCM--------EWPI--QYLKIVTGTVDYTRPGAEYLVDGSKIHCS 118

  Fly   116 EEYGNFLNDVALLRLESPLILSASIQPIDLPTADTPADV--DVIISGWGRIKHQGDLPRYLQYNT 178
            .:...:.||:||:....|::.....|||.|.:..:...|  .:.::|||..|..|.....||...
  Fly   119 HDKPAYHNDIALIHTAKPIVYDDLTQPIKLASKGSLPKVGDKLTLTGWGSTKTWGRYSTQLQKID 183

  Fly   179 LKSISLERCDELI---GWGVQSELCLIHEADNGACNGDSGGPAVYNNQ-VVGVAGFVW-SACGTS 238
            |..|..:.|...:   .|..:..:|...:...|:|:||||||.|..|| :|||..  | .||...
  Fly   184 LNYIDHDNCQSRVRNANWLSEGHVCTFTQEGEGSCHGDSGGPLVDANQTLVGVVN--WGEACAIG 246

  Fly   239 YPDGYARVYYHNEWIK 254
            |||.:..|.|:::||:
  Fly   247 YPDVFGSVAYYHDWIE 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1304NP_608418.1 Tryp_SPc 32..256 CDD:238113 76/233 (33%)
CG5246NP_650603.1 Tryp_SPc 42..263 CDD:238113 76/233 (33%)

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