DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1304 and CG17477

DIOPT Version :9

Sequence 1:NP_608418.1 Gene:CG1304 / 33074 FlyBaseID:FBgn0031141 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_650598.1 Gene:CG17477 / 42067 FlyBaseID:FBgn0038479 Length:267 Species:Drosophila melanogaster


Alignment Length:232 Identity:69/232 - (29%)
Similarity:118/232 - (50%) Gaps:19/232 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 VVGGEDAVKNQFPHQVSLRN-AGSHSCGGSILSRNYVLTAAHCVTNQDSNGNSVPIAAERFTIRA 95
            :|||::|.:...|:||||:. .|||.|||:|:|..:::||.|||....::         |..:..
  Fly    27 IVGGQNAAEGDAPYQVSLQTLLGSHLCGGAIISDRWIITAGHCVKGYPTS---------RLQVAT 82

  Fly    96 GSNDRFSGGVLVQVAEVIVHEEYGN--FLNDVALLRLESPLILSASIQPIDLPTADTPADV-DVI 157
            |:......|.:.....:.:|..|.:  :.||:.||.|...:..:|..|.::|||:..|... :::
  Fly    83 GTIRYAEPGAVYYPDAIYLHCNYDSPKYQNDIGLLHLNESITFNALTQAVELPTSPFPRGASELV 147

  Fly   158 ISGWGRIKHQGDLPRYLQYNTLKSISLERCDELIGWGVQSEL-----CLIHEADNGACNGDSGGP 217
            .:|||.....|.||..||....:.::...|:.::......||     |...:|:.|||:||||||
  Fly   148 FTGWGSQSAAGSLPSQLQRVQQQHLNSPACESMMSAYEDLELGPCHICAYRQANIGACHGDSGGP 212

  Fly   218 AVYNNQVVGVAGFVWSACGTSYPDGYARVYYHNEWIK 254
            .|:...:||:..| :..|....||.:..:.|:.:|::
  Fly   213 LVHQGTLVGILNF-FVPCAQGVPDIFMNIMYYRDWMR 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1304NP_608418.1 Tryp_SPc 31..253 CDD:214473 68/229 (30%)
Tryp_SPc 32..256 CDD:238113 69/232 (30%)
CG17477NP_650598.1 Tryp_SPc 27..250 CDD:238113 69/232 (30%)
Tryp_SPc 27..246 CDD:214473 68/228 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 117 1.000 Domainoid score I5856
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG25816
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.930

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