DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1304 and snk

DIOPT Version :10

Sequence 1:NP_608418.1 Gene:CG1304 / 33074 FlyBaseID:FBgn0031141 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster


Alignment Length:257 Identity:68/257 - (26%)
Similarity:115/257 - (44%) Gaps:48/257 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 VVGGEDAVKNQFPHQVSL---RNAGSH------SCGGSILSRNYVLTAAHCVTNQDSNGNSVPIA 87
            :|||.......|||..:|   :.:||.      .|||:::|..||||||||.|:.....:.|.:.
  Fly   186 IVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWGCGGALVSELYVLTAAHCATSGSKPPDMVRLG 250

  Fly    88 AERFTIRAGSNDRFSGGVLVQVAEVIVHEEYGN--FLNDVALLRLESPLILSASIQPI---DLPT 147
            |.:.      |:..:....:::..:::|.:|.:  :.:|:|||:|...:..|..::|.   .||.
  Fly   251 ARQL------NETSATQQDIKILIIVLHPKYRSSAYYHDIALLKLTRRVKFSEQVRPACLWQLPE 309

  Fly   148 ADTPADVDVIISGWGRIKHQGDLPRYLQYNTLKSISLE-----------RCDELIGWG-VQSELC 200
            ...|.   |:.:||||.:..|     .:.|.|:.:.|:           |.:..:..| ::.:.|
  Fly   310 LQIPT---VVAAGWGRTEFLG-----AKSNALRQVDLDVVPQMTCKQIYRKERRLPRGIIEGQFC 366

  Fly   201 LIH-EADNGACNGDSGGP-----AVYN--NQVVGVAGFVWSACGTSYPDGYARVYYHNEWIK 254
            ..: ......|.||||||     ..||  ..|||:..|.......:.|..|.|:|.:.:||:
  Fly   367 AGYLPGGRDTCQGDSGGPIHALLPEYNCVAFVVGITSFGKFCAAPNAPGVYTRLYSYLDWIE 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1304NP_608418.1 Tryp_SPc 32..256 CDD:238113 68/257 (26%)
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 68/257 (26%)
Blue background indicates that the domain is not in the aligned region.

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