DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1304 and LPA

DIOPT Version :10

Sequence 1:NP_608418.1 Gene:CG1304 / 33074 FlyBaseID:FBgn0031141 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_005568.2 Gene:LPA / 4018 HGNCID:6667 Length:2040 Species:Homo sapiens


Alignment Length:249 Identity:78/249 - (31%)
Similarity:112/249 - (44%) Gaps:38/249 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 PGSLNGRVVGGEDAVKNQFPHQVSLRNA-GSHSCGGSILSRNYVLTAAHCVTNQDSNGNSVPIAA 88
            |....|.:|||..|..:.:|.|||||.. |.|.|||:::|..:|||||||: .:.|..:|     
Human  1813 PKKCPGSIVGGCVAHPHSWPWQVSLRTRFGKHFCGGTLISPEWVLTAAHCL-KKSSRPSS----- 1871

  Fly    89 ERFTIRAGSNDRFSGGVLVQVAEVIVHEEYGNFLN----DVALLRLESPLILSASIQPIDLPTAD 149
              :.:..|::...:....||..||     ...||.    |:|||:|..|.:::..:.|..||:.|
Human  1872 --YKVILGAHQEVNLESHVQEIEV-----SRLFLEPTQADIALLKLSRPAVITDKVMPACLPSPD 1929

  Fly   150 --TPADVDVIISGWGRIKHQGDL-PRYLQYNTLKSISLERCDELIGWGVQSELCLIHEA-DNGAC 210
              ..|..:..|:|||  :.||.. ...|:...|..|..|.|:.      ...:|..|.| ...:|
Human  1930 YMVTARTECYITGWG--ETQGTFGTGLLKEAQLLVIENEVCNH------YKYICAEHLARGTDSC 1986

  Fly   211 NGDSGGPAVYNNQ----VVGVAGFVWSACGTSYPDGYARVYYHNEWI----KNN 256
            .||||||.|...:    :.||..:.......:.|..||||.....||    :||
Human  1987 QGDSGGPLVCFEKDKYILQGVTSWGLGCARPNKPGVYARVSRFVTWIEGMMRNN 2040

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1304NP_608418.1 Tryp_SPc 32..256 CDD:238113 74/240 (31%)
LPANP_005568.2 Kringle 28..105 CDD:395005
Kringle 142..219 CDD:395005
Kringle 256..333 CDD:395005
Kringle 370..447 CDD:395005
Kringle 484..561 CDD:395005
Kringle 598..675 CDD:395005
Kringle 712..789 CDD:395005
Kringle 826..903 CDD:395005
KR 938..1019 CDD:214527
Kringle 1054..1131 CDD:395005
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1147..1166
KR 1166..1246 CDD:214527
KR 1272..1352 CDD:214527
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1365..1388
KR 1386..1466 CDD:214527
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1476..1497
KR 1500..1581 CDD:214527
KR 1614..1695 CDD:214527
Kringle 1720..1799 CDD:395005
Tryp_SPc 1820..2034 CDD:238113 73/234 (31%)
Blue background indicates that the domain is not in the aligned region.

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