DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1304 and CG4914

DIOPT Version :10

Sequence 1:NP_608418.1 Gene:CG1304 / 33074 FlyBaseID:FBgn0031141 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_648711.1 Gene:CG4914 / 39597 FlyBaseID:FBgn0036436 Length:374 Species:Drosophila melanogaster


Alignment Length:257 Identity:72/257 - (28%)
Similarity:111/257 - (43%) Gaps:49/257 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 RVVGGEDAVKNQFPHQVSLRNAGSHSCGGSILSRNYVLTAAHCVT-----------NQDSNGNSV 84
            |:|||.....:::|....|.......|||::::..|||||||||.           .:....|..
  Fly   127 RIVGGTTTGVSEYPWMARLSYFNRFYCGGTLINDRYVLTAAHCVKGFMWFMIKVTFGEHDRCNDK 191

  Fly    85 PIAAERFTIRAGSNDRFSGGVLVQVAEVIVHEEYGNFLNDVALLRLESPLILSASIQPIDLPTAD 149
            .....||.:||.| .:||               :.||.||:|||||...:.:::.|:||.||..:
  Fly   192 ERPETRFVLRAFS-QKFS---------------FSNFDNDIALLRLNDRVPITSFIRPICLPRVE 240

  Fly   150 TPADVDV----IISGWGRIKHQGDLPRYLQYNTLKSISLERC-------DELIGWGVQSELCLIH 203
            ...|:.|    |.:|||.:|..|.....||...:..:..:.|       .::|   .::.:|..:
  Fly   241 QRQDLFVGTKAIATGWGTLKEDGKPSCLLQEVEVPVLDNDECVAQTNYTQKMI---TKNMMCSGY 302

  Fly   204 EADNG--ACNGDSGGPAV------YNNQVVGVAGFVWSACGTSYPDGYARVYYHNEWIKNNS 257
            ....|  :|.||||||.|      ...:.:|:..:.......:||..|.||..:.:||..||
  Fly   303 PGVGGRDSCQGDSGGPLVRLRPDDKRFEQIGIVSWGNGCARPNYPGVYTRVTKYLDWIVENS 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1304NP_608418.1 Tryp_SPc 32..256 CDD:238113 69/253 (27%)
CG4914NP_648711.1 Tryp_SPc 128..363 CDD:238113 69/253 (27%)

Return to query results.
Submit another query.