DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1304 and CG18179

DIOPT Version :10

Sequence 1:NP_608418.1 Gene:CG1304 / 33074 FlyBaseID:FBgn0031141 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_648340.1 Gene:CG18179 / 39124 FlyBaseID:FBgn0036023 Length:268 Species:Drosophila melanogaster


Alignment Length:285 Identity:82/285 - (28%)
Similarity:129/285 - (45%) Gaps:60/285 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 FLLLLAVP---VHSAPG--------------SLNGRVVGGEDAVKNQFPHQVSL--RNAGSHSC- 57
            |||.|:|.   |.::||              ...||:|.|..|.:.:.|:.|.|  |..||:|. 
  Fly     4 FLLTLSVALAVVAASPGFNRTSLLPQVTISEGAEGRIVNGYPAPEGKAPYIVGLLIRTDGSNSAA 68

  Fly    58 --GGSILSRNYVLTAAHCVTNQDSNGNSVPIAAERFTIRAGSNDRFSGGVLVQVAEVIVHEEYGN 120
              .|:|::.:::||||||:|            .:...|..|||..::|.....|..       .|
  Fly    69 VGAGTIIASDWILTAAHCLT------------TDYVEIHYGSNWGWNGAFRQSVRR-------DN 114

  Fly   121 FLN----------DVALLRLESPLILSASIQPIDLPTADTPAD--VDV--IISGWGRIKHQGDLP 171
            |::          |:.|:|..| :..:..|..:.||:....:|  ||.  :..|||.:.: |:|.
  Fly   115 FISHPNWPAEGGRDIGLIRTPS-VGFTDLINKVALPSFSEESDRFVDTWCVACGWGGMDN-GNLA 177

  Fly   172 RYLQYNTLKSISLERCDELIGWGVQSELCLIHEADNGACNGDSGGPAVY--NNQVVGVAGFVWSA 234
            .:||...::.||...|::..|....:::|........:|.||||||.|.  |.::|||..|....
  Fly   178 DWLQCMDVQIISNSECEQSYGTVASTDMCTRRTDGKSSCGGDSGGPLVTHDNARLVGVITFGSVD 242

  Fly   235 CGTSYPDGYARVYYHNEWIKNNSDV 259
            | .|.|.||.||..:..||::|:.:
  Fly   243 C-HSGPSGYTRVTDYLGWIRDNTGI 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1304NP_608418.1 Tryp_SPc 32..256 CDD:238113 71/244 (29%)
CG18179NP_648340.1 Tryp_SPc 40..263 CDD:238113 71/244 (29%)

Return to query results.
Submit another query.