DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1304 and CG1299

DIOPT Version :10

Sequence 1:NP_608418.1 Gene:CG1304 / 33074 FlyBaseID:FBgn0031141 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_647862.1 Gene:CG1299 / 38496 FlyBaseID:FBgn0035501 Length:511 Species:Drosophila melanogaster


Alignment Length:273 Identity:73/273 - (26%)
Similarity:117/273 - (42%) Gaps:56/273 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 VHSAPGSLNG---RVVGGEDAVKNQFPHQVSL----RNAGSHSCGGSILSRNYVLTAAHCVTNQD 78
            |....||..|   ::||||.:.|..:|....|    .:.....|||::::..:|||||||: .||
  Fly   247 VEEGCGSTVGYFKKIVGGEVSRKGAWPWIALLGYDDPSGSPFKCGGTLITARHVLTAAHCI-RQD 310

  Fly    79 SNGNSVPIAAERFTIRAG----SNDRFSGGVLVQVAEVIVHEEYG--NFLNDVALLRLESPLILS 137
            ..           .:|.|    |.|..:|.|.:.:|..:.|.:|.  |..:|:|:|.||..:..:
  Fly   311 LQ-----------FVRLGEHDLSTDTETGHVDINIARYVSHPDYNRRNGRSDMAILYLERNVEFT 364

  Fly   138 ASIQPIDLP-TADTPADVDV----IISGWGRIKHQGD---------LPRYLQYNTLKSISLER-- 186
            :.|.||.|| ||:......|    .::|||:....|:         :|.|.....::|.:.|:  
  Fly   365 SKIAPICLPHTANLRQKSYVGYMPFVAGWGKTMEGGESAQVLNELQIPIYDNKVCVQSYAKEKRY 429

  Fly   187 --CDELIGWGVQSELCL-IHEADNGACNGDSGGPAV----YNNQ----VVGVAGFVWSACGTSYP 240
              .|:.    .::.||. :.......|.||||||.:    |..|    ::||..:.......:.|
  Fly   430 FSADQF----DKAVLCAGVLSGGKDTCQGDSGGPLMLPEPYQGQLRFYLIGVVSYGIGCARPNVP 490

  Fly   241 DGYARVYYHNEWI 253
            ..|:...|..:||
  Fly   491 GVYSSTQYFMDWI 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1304NP_608418.1 Tryp_SPc 32..256 CDD:238113 69/259 (27%)
CG1299NP_647862.1 CLIP 37..92 CDD:463440
CLIP 164..216 CDD:463440
Tryp_SPc 261..503 CDD:238113 67/257 (26%)
Blue background indicates that the domain is not in the aligned region.

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