DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1304 and Tmprss11b

DIOPT Version :10

Sequence 1:NP_608418.1 Gene:CG1304 / 33074 FlyBaseID:FBgn0031141 Length:260 Species:Drosophila melanogaster
Sequence 2:XP_063129516.1 Gene:Tmprss11b / 365265 RGDID:1303278 Length:420 Species:Rattus norvegicus


Alignment Length:247 Identity:79/247 - (31%)
Similarity:120/247 - (48%) Gaps:32/247 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 RVVGGEDAVKNQFPHQVSLRNAGSHSCGGSILSRNYVLTAAHCV--TNQDSNGNSVPIAAERFTI 93
            |:.||..|.|.::|.|.|||..|.|.||.|::...::||||||.  ||...|          .|:
  Rat   188 RITGGSTAQKGEWPWQASLRVNGKHHCGASLIGERFLLTAAHCFLRTNNPKN----------LTV 242

  Fly    94 RAGSNDRFSGGVLVQ-VAEVIVHEEY--GNFLNDVALLRLESPLILSASIQPIDLPTADT--PAD 153
            ..|:  |.:...:.. |.|||:||:|  |...:|||:::|...:.....:..:.||.|..  |..
  Rat   243 SFGT--RVTPAYMQHYVEEVIIHEDYVKGQHHDDVAIIKLTEKVSFRNDVHRVCLPEATQVFPPG 305

  Fly   154 VDVIISGWGRIKHQGDLPRYLQYNTLKSISLERCDELIGWG---VQSELCLIH-EADNGACNGDS 214
            ..|:::|||.:.:.|..|..||..::|.|....|:....:|   :.:.||..: |....||.|||
  Rat   306 EGVVVTGWGSLSYNGKSPLLLQKASIKIIDTNACNSEEAYGGRIMDTMLCAGYMEGYVDACQGDS 370

  Fly   215 GGPAVYNNQ-----VVGVAGFVWS-ACG-TSYPDGYARVYYHNEWIKNNSDV 259
            |||.|:.|.     :||:..  |. .|| .:.|..|.||..:.:||.:.:.:
  Rat   371 GGPLVHPNSRDIWYLVGIVS--WGHECGRVNKPGVYMRVTSYRDWIASKTGI 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1304NP_608418.1 Tryp_SPc 32..256 CDD:238113 78/241 (32%)
Tmprss11bXP_063129516.1 None

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