DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1304 and l(2)k05911

DIOPT Version :10

Sequence 1:NP_608418.1 Gene:CG1304 / 33074 FlyBaseID:FBgn0031141 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_723797.3 Gene:l(2)k05911 / 34731 FlyBaseID:FBgn0284244 Length:639 Species:Drosophila melanogaster


Alignment Length:185 Identity:39/185 - (21%)
Similarity:60/185 - (32%) Gaps:62/185 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 NFLNDLDVISEDELIITHSSIRHDCRH-------FFNLVLEHQGDGRILHLKISTGTVKVLAKNL 180
            |.|||.....|....:.|..|:  |.|       ||:.|  ....|.:...::||.|:.:....|
  Fly   223 NILNDSTKNEEHSANVRHKWIQ--CMHDHQQSTSFFSTV--ENIFGLMCLAQVSTATLSICDAML 283

  Fly   181 ------YFPNGIQLTPDKKSAIFAECS----MARIKKLDLETGKIDIFCENLPGLPDNIRGTPRG 235
                  ::|     |......:|.:.|    :..:.:|     |||.....:..:|         
  Fly   284 LVLLTDWYP-----TYSYLYVVFVQLSGFFVIGHLVEL-----KIDALYNKIISMP--------- 329

  Fly   236 TFWVGLAATRSKNY---------PSLLDRLGNWP-----------GVRQFFVDIV 270
              |..|.....|.:         |.:|...|..|           |:.||||.|:
  Fly   330 --WYRLPVKEQKEFRFLLSRQQCPMILTAYGFHPMNFEAYMSVLKGLYQFFVMIL 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1304NP_608418.1 Tryp_SPc 32..256 CDD:238113 31/158 (20%)
l(2)k05911NP_723797.3 CLIP 111..174 CDD:197829
PTZ00449 <198..>376 CDD:185628 34/177 (19%)
Tryp_SPc 400..637 CDD:238113
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.