DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1304 and Send1

DIOPT Version :9

Sequence 1:NP_608418.1 Gene:CG1304 / 33074 FlyBaseID:FBgn0031141 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster


Alignment Length:262 Identity:101/262 - (38%)
Similarity:128/262 - (48%) Gaps:37/262 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 FLLLLA--------VPVHSAPGSLNGRVVGGEDAVKNQFPHQVSLRNAGSHSCGGSILSRNYVLT 69
            |.||||        |||...|..   |::||........|.||||:..|.|.|||||.|:..::|
  Fly     6 FHLLLAVHLLISPVVPVLLEPSE---RIIGGSSMDITDVPWQVSLQYYGEHFCGGSIYSKTIIIT 67

  Fly    70 AAHCVTNQDSNGNSVPIAAERFTIRAGSNDRFSGGVLVQVAEVIVHEEYG--NFLNDVALLRLES 132
            ||||:..           .|| :|||||:...||||:|.|...|:|.::.  |..||||:|:|.|
  Fly    68 AAHCIKE-----------GER-SIRAGSSLHDSGGVVVGVEAYIIHPQFDKHNMENDVAVLKLSS 120

  Fly   133 PLILSASIQPIDLPTADTPADVDVIISGWGRIKHQGDL---PRYLQYNTLKSISLERCDELIGWG 194
            ||..|.|||.|.|...|.|.....:.:||||    |:.   ||.||...:....|..|....|.|
  Fly   121 PLSFSDSIQTIPLAETDPPTSSSALATGWGR----GNFLIRPRQLQGVEILIRPLIVCKLKYGNG 181

  Fly   195 VQSELCLIHEADNGACNGDSGGPAVYNNQVVGVAGFVWS-AC-GTSYPDGYARVYYHNEWIKNNS 257
            |.:|.........|.|.||||||.|:|.|:||:.....: .| |:|.   ||.|..:..||.:..
  Fly   182 VFNEDICAGRMGKGGCYGDSGGPLVFNGQLVGITSRTGNIVCLGSSL---YASVARYRNWILSAI 243

  Fly   258 DV 259
            ||
  Fly   244 DV 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1304NP_608418.1 Tryp_SPc 31..253 CDD:214473 88/228 (39%)
Tryp_SPc 32..256 CDD:238113 89/230 (39%)
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 88/228 (39%)
Tryp_SPc 30..239 CDD:238113 87/227 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24276
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.020

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