DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1304 and Tmprss11b

DIOPT Version :10

Sequence 1:NP_608418.1 Gene:CG1304 / 33074 FlyBaseID:FBgn0031141 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_795998.2 Gene:Tmprss11b / 319875 MGIID:2442893 Length:416 Species:Mus musculus


Alignment Length:247 Identity:79/247 - (31%)
Similarity:119/247 - (48%) Gaps:32/247 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 RVVGGEDAVKNQFPHQVSLRNAGSHSCGGSILSRNYVLTAAHCV--TNQDSNGNSVPIAAERFTI 93
            |:.||..|.|.::|.|.|||..|.|.||.|::...::||||||.  ||...|          .|:
Mouse   184 RITGGSTAHKGEWPWQASLRVNGKHYCGASLIGERFLLTAAHCFQGTNNPKN----------LTV 238

  Fly    94 RAGSNDRFSGGVLV-QVAEVIVHEEY--GNFLNDVALLRLESPLILSASIQPIDLP--TADTPAD 153
            ..|:  |.:...:. .|.|:|:||:|  |...:|||:::|...:..:..:..:.||  |...|..
Mouse   239 SFGT--RVTPAYMQHSVQEIIIHEDYVKGEHHDDVAVIKLTEKVSFNNDVHRVCLPESTQIFPPG 301

  Fly   154 VDVIISGWGRIKHQGDLPRYLQYNTLKSISLERCDELIGWG---VQSELCLIH-EADNGACNGDS 214
            ..|:::|||...:.|..|..||..::|.|....|:....:|   |.:.||..: |....||.|||
Mouse   302 EGVVVTGWGSFSYNGKSPLLLQKASIKIIDTNTCNSEEAYGGRIVDTMLCAGYLEGSIDACQGDS 366

  Fly   215 GGPAVYNNQ-----VVGVAGFVWS-ACG-TSYPDGYARVYYHNEWIKNNSDV 259
            |||.|:.|.     :||:..  |. .|| .:.|..|.||..:..||.:.:.:
Mouse   367 GGPLVHPNSRDIWYLVGIVS--WGHECGRVNKPGVYMRVTSYRNWIASKTGI 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1304NP_608418.1 Tryp_SPc 32..256 CDD:238113 78/241 (32%)
Tmprss11bNP_795998.2 SEA 46..143 CDD:460188
Tryp_SPc 185..413 CDD:238113 78/241 (32%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.