DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1304 and Tmprss3

DIOPT Version :10

Sequence 1:NP_608418.1 Gene:CG1304 / 33074 FlyBaseID:FBgn0031141 Length:260 Species:Drosophila melanogaster
Sequence 2:XP_038954650.1 Gene:Tmprss3 / 309665 RGDID:1310135 Length:454 Species:Rattus norvegicus


Alignment Length:248 Identity:77/248 - (31%)
Similarity:115/248 - (46%) Gaps:25/248 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 SAPGSLNG---RVVGGEDAVKNQFPHQVSLRNAGSHSCGGSILSRNYVLTAAHCVTNQDSNGNSV 84
            ||.|...|   |:|||..:...|:|.||||:..|.|.||||:::..:::||||||.:.       
  Rat   205 SACGMRTGYSPRIVGGNVSSLTQWPWQVSLQFQGYHLCGGSVITPLWIVTAAHCVYDL------- 262

  Fly    85 PIAAERFTIRAGSNDRFSGGVLVQVAE-VIVHEEY--GNFLNDVALLRLESPLILSASIQPIDLP 146
             ...:.:|::.|........|...:.| :|.|.:|  ....||:||::|..||....:||||.||
  Rat   263 -YHPKSWTVQVGLVSLMDSPVPSHLVEKIIYHSKYKPKRLGNDIALMKLSEPLTFDETIQPICLP 326

  Fly   147 TADT--PADVDVIISGWGRIKH-QGDLPRYLQYNTLKSISLERCDELIGWG---VQSELCLIH-E 204
            .::.  |.......||||..:. .||....|.:..:..||.:.|:....:|   ..|.||..: :
  Rat   327 NSEENFPDGKLCWTSGWGATEDGAGDASPVLNHAAVPLISNKICNHRDVYGGIISPSMLCAGYLK 391

  Fly   205 ADNGACNGDSGGPAVYNN----QVVGVAGFVWSACGTSYPDGYARVYYHNEWI 253
            ....:|.||||||.|...    ::||...|.......:.|..|.|:....:||
  Rat   392 GGVDSCQGDSGGPLVCQERRLWKLVGATSFGIGCAEVNKPGVYTRITSFLDWI 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1304NP_608418.1 Tryp_SPc 32..256 CDD:238113 72/236 (31%)
Tmprss3XP_038954650.1 LDLa 74..107 CDD:238060
SRCR_2 112..211 CDD:464747 3/5 (60%)
Tryp_SPc 216..444 CDD:214473 71/235 (30%)
Blue background indicates that the domain is not in the aligned region.

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