DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1304 and Tpsg1

DIOPT Version :10

Sequence 1:NP_608418.1 Gene:CG1304 / 33074 FlyBaseID:FBgn0031141 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_001426649.1 Gene:Tpsg1 / 302990 RGDID:631355 Length:320 Species:Rattus norvegicus


Alignment Length:271 Identity:93/271 - (34%)
Similarity:129/271 - (47%) Gaps:43/271 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 FLLLLAVPVHSAPGSLNG-----------RVVGGEDAVKNQFPHQVSLRNAGSHSCGGSILSRNY 66
            ||||||||..|.....:|           |:|||..|....:|.|.|||....|.||||:||..:
  Rat     9 FLLLLAVPGISCEALQSGCGQPQVSHAGSRIVGGHAAQAGAWPWQASLRLQKVHVCGGSLLSPEW 73

  Fly    67 VLTAAHCVTNQDSNGNSVPIAAERFTIRAGSNDRFSGGVLVQVAEVIVHEEY----GNFLNDVAL 127
            |||||||.:. ..|.:...:.....||..  :..||     .|.::|::...    |: ..|:||
  Rat    74 VLTAAHCFSG-SVNSSDYEVHLGELTITL--SPHFS-----TVKQIIMYSSAPGPPGS-SGDIAL 129

  Fly   128 LRLESPLILSASIQPIDLP--TADTPADVDVIISGWGRIKHQGDL--PRYLQYNTLKSISLERCD 188
            ::|.:|:.||:.:||:.||  :||....:...::|||..:....|  |..||...:..:.:|.|.
  Rat   130 VQLATPVALSSQVQPVCLPEASADFHPGMQCWVTGWGYTQEGEPLKPPYNLQEAKVSVVDVETCS 194

  Fly   189 ELI----GWGVQSE-LCLIHEADNGACNGDSGGPAVYNNQVVGV---AGFV-W-SACG-TSYPDG 242
            :..    |..:||: ||.....|  ||..|||||.|.  :|.|:   ||.| | ..|| ...|..
  Rat   195 QAYSSSNGSLIQSDMLCAWGPGD--ACQDDSGGPLVC--RVAGIWQQAGVVSWGEGCGRPDRPGV 255

  Fly   243 YARVYYHNEWI 253
            ||||..:..||
  Rat   256 YARVTAYVNWI 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1304NP_608418.1 Tryp_SPc 32..256 CDD:238113 82/241 (34%)
Tpsg1NP_001426649.1 None

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