DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1304 and Tmprss13

DIOPT Version :10

Sequence 1:NP_608418.1 Gene:CG1304 / 33074 FlyBaseID:FBgn0031141 Length:260 Species:Drosophila melanogaster
Sequence 2:XP_063121182.1 Gene:Tmprss13 / 300682 RGDID:1310872 Length:552 Species:Rattus norvegicus


Alignment Length:264 Identity:77/264 - (29%)
Similarity:128/264 - (48%) Gaps:41/264 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 HSAPGSLNGRVVGGEDAVKNQFPHQVSLRNAGSHSCGGSILSRNYVLTAAHC--VTNQDSNGNSV 84
            |....::.||:|||....::::|.||||....:|.|||:::...:|||||||  ||.:.      
  Rat   301 HCGLRAMTGRIVGGALTSESKWPWQVSLHFGTTHICGGTLIDAQWVLTAAHCFFVTREK------ 359

  Fly    85 PIAAERFTIRAGSNDRFSGGVLVQVAEVIVHEEYGNFLN-----DVALLRLESPLILSASIQPID 144
              ..|.:.:.||:::.........::::|::   ||:.:     |:||:||..||.|||.|.|..
  Rat   360 --ILEGWKVYAGTSNLHQLPEAASISQIIIN---GNYTDEQDDYDIALVRLSKPLTLSAHIHPAC 419

  Fly   145 LPTADTPADVDVI--ISGWGRIKHQGD----LPRYLQYNTLKSISLERCDELIGWGVQSELCLIH 203
            ||.......::..  |:|:|:.|...:    ..|.:|.|.   |..::|::.:.:.......::.
  Rat   420 LPLHGQTFGLNETCWITGFGKTKETDEKTSPFLREVQVNL---IDFKKCNDYLVYDSYLTPRMMC 481

  Fly   204 EAD----NGACNGDSGGPAV--YNNQ--VVGVAGFVW-SACG-TSYPDGYARVYYHNEWI--KNN 256
            ..|    ..:|.||||||.|  .||:  :.||..  | :.|| .:.|..|.:|.....||  |..
  Rat   482 AGDLRGGRDSCQGDSGGPLVCEQNNRWYLAGVTS--WGTGCGQKNKPGVYTKVTEVLPWIYRKME 544

  Fly   257 SDVK 260
            |:|:
  Rat   545 SEVR 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1304NP_608418.1 Tryp_SPc 32..256 CDD:238113 72/248 (29%)
Tmprss13XP_063121182.1 None

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