DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1304 and Cela3b

DIOPT Version :10

Sequence 1:NP_608418.1 Gene:CG1304 / 33074 FlyBaseID:FBgn0031141 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_001100162.1 Gene:Cela3b / 298567 RGDID:1307819 Length:269 Species:Rattus norvegicus


Alignment Length:269 Identity:91/269 - (33%)
Similarity:128/269 - (47%) Gaps:33/269 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LLLLAVPVHSAPGSLN--GRVVGGEDAVKNQFPHQVSLR--NAGS--HSCGGSILSRNYVLTAAH 72
            |||:|:.......|.|  .|||.|||||...:|.||||:  ..||  |:|||::::.::|:||.|
  Rat     8 LLLVALASGCGQPSYNPSSRVVNGEDAVPYSWPWQVSLQYEKDGSFHHTCGGTLIAPDWVMTAGH 72

  Fly    73 CVTNQDSNGNSVPIAAERFTIRAGSNDRFSGGVLVQVAEVIVHEEYGNFL----NDVALLRLESP 133
            |:    |...:..:....|  ..|..:.....:.|...::.||.::.:..    ||:||::|...
  Rat    73 CI----STSRTYQVVLGEF--ERGVEEGPEQVIPVNAGDLFVHPKWNSNCVSCGNDIALVKLSRS 131

  Fly   134 LILSASIQPIDLPTAD--TPADVDVIISGWGRIKHQGDLPRYLQYNTLKSISLERCDELIGWGV- 195
            ..|..::|...||.|.  .|......||||||:...|.||..||...|..:....|.:...||. 
  Rat   132 AQLGDTVQLACLPPAGEILPNGAPCYISGWGRLSTNGPLPDKLQQALLPVVDYAHCSKWDWWGFS 196

  Fly   196 --QSELCLIHEADNGACNGDSGGP---AVYNN--QVVGVAGFVWS-ACGT-SYPDGYARVYYHNE 251
              ::.:|...:..:| ||||||||   ...|.  ||.||..||.| .|.| ..|..:.||...||
  Rat   197 VKKTMVCAGGDIQSG-CNGDSGGPLNCPAENGTWQVHGVTSFVSSLGCNTLKKPTVFTRVSAFNE 260

  Fly   252 WIK----NN 256
            ||:    ||
  Rat   261 WIEETIANN 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1304NP_608418.1 Tryp_SPc 32..256 CDD:238113 82/247 (33%)
Cela3bNP_001100162.1 Tryp_SPc 28..265 CDD:238113 82/243 (34%)

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