DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1304 and Klk1c12

DIOPT Version :10

Sequence 1:NP_608418.1 Gene:CG1304 / 33074 FlyBaseID:FBgn0031141 Length:260 Species:Drosophila melanogaster
Sequence 2:XP_017444409.1 Gene:Klk1c12 / 292855 RGDID:1303192 Length:262 Species:Rattus norvegicus


Alignment Length:264 Identity:78/264 - (29%)
Similarity:118/264 - (44%) Gaps:37/264 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 FLLLLAVPVHSAPGSLNGRVVGGEDAVKNQFPHQVSLRNAGSHSCGGSILSRNYVLTAAHCVTNQ 77
            ||.|....:.:||.. ..|||||....||..|.||::.|  .:.|||.::..::|:|||||.::.
  Rat     7 FLFLSVGRIDAAPPG-QSRVVGGYKCEKNSQPWQVAVIN--RYLCGGVLIDPSWVITAAHCYSHA 68

  Fly    78 DSNGNSVPIAAERFTIRAGSNDRFSGGVLVQ---VAEVIVHEEYGNFL-------------NDVA 126
            .||          :.:..|.|:.|......|   |.:...|.:|..|.             ||:.
  Rat    69 LSN----------YHVLLGRNNLFKDEPFAQYRFVNQSFPHPDYNPFFMKNHTLFPGDDHSNDLM 123

  Fly   127 LLRLESPLILSASIQPIDLPTADTPADVDVIISGWGRIKH-QGDLPRYLQYNTLKSISLERCDEL 190
            ||.|..|..::..::.|||||.:.......:.|||...|. :.:.|..||...:..:|.|:|.:.
  Rat   124 LLHLSEPADITDGVKVIDLPTEEPKVGSTCLASGWSSTKPLEWEFPDDLQCVNINILSNEKCIKA 188

  Fly   191 IGWGVQSELCLIHEADNG--ACNGDSGGPAVYNNQVVGVAGFVWSA--CG-TSYPDGYARVYYHN 250
            ....|...:....|.:.|  .||||||||.:.:..:.|:..  ||:  || |:.|..|.::....
  Rat   189 HTQMVTDVMLCAGELEGGKDTCNGDSGGPLLCDGVLQGITS--WSSVPCGETNRPAIYTKLIKFT 251

  Fly   251 EWIK 254
            .|||
  Rat   252 SWIK 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1304NP_608418.1 Tryp_SPc 32..256 CDD:238113 72/245 (29%)
Klk1c12XP_017444409.1 Tryp_SPc 25..257 CDD:238113 72/245 (29%)

Return to query results.
Submit another query.