DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1304 and Habp2

DIOPT Version :10

Sequence 1:NP_608418.1 Gene:CG1304 / 33074 FlyBaseID:FBgn0031141 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_001001505.2 Gene:Habp2 / 292126 RGDID:1302979 Length:558 Species:Rattus norvegicus


Alignment Length:290 Identity:79/290 - (27%)
Similarity:118/290 - (40%) Gaps:60/290 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 AAILLGSFLLLLAVPVHSAPG-----------SLNGRVVGGEDAVKNQFPHQVSLRNA------- 52
            ||..|||    |..||...||           ....|:.||..:...:.|.||||:.:       
  Rat   279 AANPLGS----LQEPVMELPGFDSCGKTEMTEHAVKRIYGGFKSTAGKHPWQVSLQTSLPLTTSM 339

  Fly    53 -GSHSCGGSILSRNYVLTAAHCVTNQDSNGNSVPIAAERFTIRAGSNDRFSGGVLVQVAEVIVHE 116
             ..|.||||::...:||||||| |:..:....|.:..:...........|      :|.:::.:.
  Rat   340 PQGHFCGGSLIHPCWVLTAAHC-TDMSTKHLKVVLGDQDLKKTESHEQTF------RVEKILKYS 397

  Fly   117 EYGNF----LNDVALLRLESPL-----ILSASIQPIDLPTADTPADVDVIISGWGRIKHQGDLPR 172
            :|...    .||:|||:|: |:     :.|..::.:.||:...|:..:..||||| :...|:..|
  Rat   398 QYNERDEIPHNDIALLKLK-PVGGHCALESKYVKTVCLPSDPFPSGTECHISGWG-VTETGEGSR 460

  Fly   173 YLQYNTLKSISLERC------DELIGWGVQSELCL--IHEADNGACNGDSGGPAVYNNQ----VV 225
            .|....:|.|:...|      |..|.   .|.:|.  :.:..:..|.||||||......    |.
  Rat   461 QLLDAKVKLIANALCNSRQLYDHTID---DSMICAGNLQKPGSDTCQGDSGGPLTCEKDGTYYVY 522

  Fly   226 GVAGFVW-SACGTSYPDGYARVYYHNEWIK 254
            |:..  | ..||.. |..|.:|.....|||
  Rat   523 GIVS--WGQECGKK-PGVYTQVTKFLNWIK 549

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1304NP_608418.1 Tryp_SPc 32..256 CDD:238113 68/253 (27%)
Habp2NP_001001505.2 EGF_CA 71..107 CDD:238011
KR 191..275 CDD:238056
Tryp_SPc 312..551 CDD:238113 68/253 (27%)
Blue background indicates that the domain is not in the aligned region.

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