DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1304 and Hpn

DIOPT Version :10

Sequence 1:NP_608418.1 Gene:CG1304 / 33074 FlyBaseID:FBgn0031141 Length:260 Species:Drosophila melanogaster
Sequence 2:XP_038958886.1 Gene:Hpn / 29135 RGDID:61982 Length:539 Species:Rattus norvegicus


Alignment Length:249 Identity:88/249 - (35%)
Similarity:120/249 - (48%) Gaps:36/249 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 RVVGGEDAVKNQFPHQVSLRNAGSHSCGGSILSRNYVLTAAHCVTNQDSNGNSVPIAAERFTIRA 95
            |:|||:|:...::|.|||||..|:|.||||:||.::|||||||...::.       ...|:.:.|
  Rat   203 RIVGGQDSSLGRWPWQVSLRYDGTHLCGGSLLSGDWVLTAAHCFPERNR-------VLSRWRVFA 260

  Fly    96 GSNDRFS-GGVLVQVAEVIVHEEYGNF--------LNDVALLRLESPLILSASIQPIDLPTADTP 151
            |:..|.| ..|.:.|..||.|..|..|        .||:||:.|.|.|.|:..|||:.||.|. .
  Rat   261 GAVARTSPHAVQLGVQAVIYHGGYLPFRDPTIDENSNDIALVHLSSSLPLTEYIQPVCLPAAG-Q 324

  Fly   152 ADVD---VIISGWGRIKHQGDLPRYLQYNTLKSISLERCDELIGWGVQSE---LCLIH-EADNGA 209
            |.||   ..::|||..:..|.....||...:..||.|.|:....:|.|.:   .|..: |....|
  Rat   325 ALVDGKVCTVTGWGNTQFYGQQAVVLQEARVPIISNEVCNSPDFYGNQIKPKMFCAGYPEGGIDA 389

  Fly   210 CNGDSGGPAVYNNQVVGVAGFVWSACG----------TSYPDGYARVYYHNEWI 253
            |.||||||.|..:::.|.:.  |..||          ...|..|.:|....|||
  Rat   390 CQGDSGGPFVCEDRISGTSR--WRLCGIVSWGTGCALARKPGVYTKVIDFREWI 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1304NP_608418.1 Tryp_SPc 32..256 CDD:238113 87/248 (35%)
HpnXP_038958886.1 Hepsin-SRCR 92..200 CDD:462736
Tryp_SPc 204..441 CDD:238113 85/246 (35%)
Blue background indicates that the domain is not in the aligned region.

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