DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1304 and Tmprss5

DIOPT Version :10

Sequence 1:NP_608418.1 Gene:CG1304 / 33074 FlyBaseID:FBgn0031141 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_695223.2 Gene:Tmprss5 / 266681 RGDID:628625 Length:445 Species:Rattus norvegicus


Alignment Length:261 Identity:74/261 - (28%)
Similarity:112/261 - (42%) Gaps:47/261 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 LNGRVVGGEDAVKNQFPHQVSLRNAGSHSCGGSILSRNYVLTAAHCVTNQDSNGNSVPIAAERFT 92
            |..|:|||:.....::|.|.|:.....|:||.|:|:..:|:|||||:.:              |.
  Rat   204 LASRIVGGQAVASGRWPWQASVMLGSRHTCGASVLAPYWVVTAAHCMYS--------------FR 254

  Fly    93 IRAGSNDRFSGGVL----------VQVAEVIVHEEYG--NFLNDVALLRLESPLILSASIQPIDL 145
            :...|:.|...|::          ..|.::|.|..|.  |...|||||:|.:|:..|.::..:.|
  Rat   255 LSRLSSWRVHAGLVSHSAVRQHQGTMVEKIIPHPLYSAQNHDYDVALLQLRTPINFSDTVSAVCL 319

  Fly   146 PTADT--PADVDVIISGWGRI----KHQGDLPRYLQYNTLKSISLERCDE---LIGWGVQSELC- 200
            |..:.  |......:||||..    .|..|.   ||...:..:|.:.|:.   ..|......|| 
  Rat   320 PAKEQHFPQGSQCWVSGWGHTDPSHTHSSDT---LQDTMVPLLSTDLCNSSCMYSGALTHRMLCA 381

  Fly   201 --LIHEADNGACNGDSGGPAVYNN----QVVGVAGFVWSACGTSYPDGYARVYYHNEWIKNNSDV 259
              |...||  ||.||||||.|..:    .:|||..:.......:.|..||:|....:||.:...|
  Rat   382 GYLDGRAD--ACQGDSGGPLVCPSGDTWHLVGVVSWGRGCAEPNRPGVYAKVAEFLDWIHDTVQV 444

  Fly   260 K 260
            :
  Rat   445 R 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1304NP_608418.1 Tryp_SPc 32..256 CDD:238113 71/251 (28%)
Tmprss5NP_695223.2 SRCR_2 106..203 CDD:464747
Tryp_SPc 208..441 CDD:238113 71/251 (28%)
Blue background indicates that the domain is not in the aligned region.

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